Return to main results Retrieve Phyre Job Id

Job DescriptionO14467
Confidence89.22%DateMon Jul 2 19:10:22 BST 2012
Rank103Aligned Residues45
% Identity11%Templatec1yseA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna-binding protein satb1; PDBTitle: solution structure of the mar-binding domain of satb1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100... ......110.........120
Predicted Secondary structure 






.







Query SS confidence 



























.
















Query Sequence  KLDPNVGRAISRARTDKKMSQKDLATKI. NEKPTVVNDYEAARAIP
Query Conservation   
   

  
   
   



 


   .


   

  
 
   
Alig confidence 



























.
















Template Conservation   

 

   
  

    


  

  

 










 

 
Template Sequence  EVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDP
Template Known Secondary structure  S

TT



S
TT


G
Template Predicted Secondary structure 












Template SS confidence 













































   370.........380.........390.........400.........410.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions