Job Description O14467 Confidence 92.74% Date Mon Jul 2 19:10:22 BST 2012 Rank 93 Aligned Residues 54 % Identity 20% Template c1hf0A_ PDB info PDB header:transcription factor Chain: A: PDB Molecule:octamer-binding transcription factor 1; PDBTitle: crystal structure of the dna-binding domain of oct-1 bound2 to dna as a dimer Resolution 2.7 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.																										.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	V	G	R	A	I	S	R	A	R	T	D	K	K	M	S	Q	K	D	L	A	T	K	I	N	.	.	.	.	.	.	E	K	P	T	V	V	N	D	Y	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	A	I	P	N	Q	Q	V	L	S	K
Query Conservation																												.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	F	A	K	T	F	K	Q	R	R	I	K	L	G	F	T	Q	G	D	V	G	L	A	M	G	K	L	Y	G	N	D	F	S	Q	T	T	I	S	R	F	E	A	L	N	L	S	F	K	N	M	S	K	L	K	P	L	L	E	K	W	L	N	D	A	E	R	K	K	R	T	S	I	E	T	N	I	R	V	A
Template Known Secondary structure															T	T														S	S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		128	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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