 |
| Job Description | O60200 | | Confidence | 3.51% | Date | Mon Jul 2 19:10:23 BST 2012 |
| Rank | 47 | Aligned Residues | 26 |
| % Identity | 12% | Template | d2cazb1 |
| SCOP info | Long alpha-hairpin
| Endosomal sorting complex assembly domain
| VPS28 N-terminal domain
|
| Resolution | 3.6 |
|
| | |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
| Predicted Secondary structure | |
 | | | | | |
|
|
|
|
|
|
| | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Y | S | E | K | F | L | K | G | K | S | V | E | N | E | C | S | K | Q | W | Y | A | Y | T | T | C | V |
| Query Conservation | |
| |
|
|
|
|
|
| | | | | | |
| | | |
| | |
|
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
| |
|
| | |
|
|
| | |
| |
|
|
| |
|
|
| | | |
| Template Sequence | |
Y | L | K | D | S | I | D | D | T | Q | Y | T | N | T | V | D | K | L | L | K | Q | F | K | V | Y | L |
| Template Known Secondary structure | |
| T | T | T | S | S |
| | | | | | | | | | | | | | | | | | | |
| Template Predicted Secondary structure | |
| |
|
|
|
|
| | | | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
