Return to main results Retrieve Phyre Job Id

Job DescriptionO60200
Confidence2.35%DateMon Jul 2 19:10:23 BST 2012
Rank79Aligned Residues11
% Identity27%Templatec3hsbB_
PDB info PDB header:rna binding protein/rnaChain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70...
Predicted Secondary structure 
Query SS confidence 










Query Sequence  KPALDEAREEA
Query Conservation 
 

  




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Template Conservation 
 


  


 
Template Sequence  DQFLNQIRKEN
Template Known Secondary structure  TT
Template Predicted Secondary structure 

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   8.10........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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