Return to main results Retrieve Phyre Job Id

Job DescriptionP00045
Confidence99.56%DateMon Jul 2 19:10:25 BST 2012
Rank39Aligned Residues88
% Identity22%Templated1m70a1
SCOP infoCytochrome c Cytochrome c Two-domain cytochrome c
Resolution1.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  PGSAKKGATLFKTRCQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTNPKKYIPGTK
Query Conservation   

   
  

   
  

     
    

 
                               
      
     
  
Alig confidence 












.




















..............






























Template Conservation 


   

     .
  


    
     
 
  ..............                               
Template Sequence  AGDAEAGQGKVAV. CGACHGVDGNSPAPNFPKLAG. . . . . . . . . . . . . . QGERYLLKQLQDIKAGSTPGAPEGVGRKVLE
Template Known Secondary structure 


TT
GG.G
TTS



TTS


TT..............

STT

TTSS


GG
Template Predicted Secondary structure 


.




















..............














Template SS confidence 















































































   1........10... ......20.........30.... .....40.........50.........60.....
 
   90... ......100.........110..
Predicted Secondary structure 



.




Query SS confidence 



.


















Query Sequence  MAFA. GLKKEKDRNDLITYMTKAA
Query Conservation 

  .  

  
  





 

 
Alig confidence 



.


















Template Conservation 

     


 

  
 


 

 
Template Sequence  MTGMLDPLSDQDLEDIAAYFSSQK
Template Known Secondary structure  GTTTTTT

S
Template Predicted Secondary structure 






Template SS confidence 























   66...70.........80.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions