Job Description P00045 Confidence 99.58% Date Mon Jul 2 19:10:25 BST 2012 Rank 34 Aligned Residues 92 % Identity 28% Template c3mk7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit o; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.																											.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	E	S	T	G	F	K	P	G	S	A	K	K	G	A	T	L	F	.	K	T	R	C	Q	Q	C	H	T	I	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	N	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	V	K
Query Conservation																					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		P	V	E	G	M	K	P	Y	T	A	L	Q	L	E	G	R	D	L	Y	I	R	E	G	C	V	G	C	H	S	Q	M	I	R	P	F	R	A	E	T	E	R	Y	G	H	Y	S	V	A	G	E	S	V	Y	D	H	P	F	L	W	G	S	K	R	T	G	P	D	L	A	R	V	G	G	R	.	.	.	.	.	.
Template Known Secondary structure				T	T																			T	G	G	G	T							S	S								S	S				G	G	G	G	T	T		S	S					S			S	S				T	T		T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																																						.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	S	Y	T	D	A	N	I	N	K	N	V	K	W	D	E	D	S	M	S	E	Y	L	T	N	P	K	K	Y	I	P	G	T	K	M	A	F	A	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	D	D	W	H	R	A	H	L	Y	N	P	R	N	V	V	P	E	S	K	M	P	S	Y	P	W	L	V	E	N	T	L	D	G	K	D	T	A	K	K	M	S	A	L	R	M	L	G	V	P	Y	T	E	E	D	I	A	G	A	R	D	S	V	N	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																S	T	T							T						B				T	T											T	T									T	T	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	D	R	N	D	L	I	T	Y	M	T	K	A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	E	M	D	A	M	V	A	Y	L	Q	V	L	G	T
Template Known Secondary structure			B										T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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