Return to main results Retrieve Phyre Job Id

Job DescriptionP00045
Confidence99.93%DateMon Jul 2 19:10:25 BST 2012
Rank9Aligned Residues109
% Identity37%Templatec3m97X_
PDB info PDB header:electron transportChain: X: PDB Molecule:cytochrome c-552; PDBTitle: structure of the soluble domain of cytochrome c552 with its flexible2 linker segment from paracoccus denitrificans
Resolution1.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  MAKESTGFKPGSAKKGATLFKTRCQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTN
Query Conservation   
  
 
   

   
  

   
  

     
    

 
                               
      
Alig confidence 



















.













..










































Template Conservation            

   
  

.  
  

   
 
 .. 

 
  
                            
      
Template Sequence  HADFATVLASADPAAGEKVF. GKCKACHKLDGNDG. . VGPHLNGVVGRTVAGVDGFNYSDPMKAHGGDWTPEALQEFLTN
Template Known Secondary structure 


T

G.GGTTTT

SSS

S..SS


TT
TT
BTT
STT




SB


Template Predicted Secondary structure 







.











..
























Template SS confidence 















































































   10.........20......... 30.........40... ......50.........60.........70.........80......
 
   81........90.........100.........110..
Predicted Secondary structure 

















Query SS confidence 































Query Sequence  PKKYIPGTKMAFAGLKKEKDRNDLITYMTKAA
Query Conservation 
     
  

    

  
  





 

 
Alig confidence 































Template Conservation           

    
   

 





 


Template Sequence  PKAVVKGTKMAFAGLPKIEDRANLIAYLEGQQ
Template Known Secondary structure  STT
S






ST

Template Predicted Secondary structure 















Template SS confidence 































   109110.........120.........130.........140
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions