Job Description P00045 Confidence 99.61% Date Mon Jul 2 19:10:25 BST 2012 Rank 29 Aligned Residues 85 % Identity 27% Template c3cp5A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: cytochrome c from rhodothermus marinus Resolution 1.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	G	F	K	P	G	S	A	K	K	G	A	T	L	F	K	T	R	C	Q	Q	C	H	T	I	E	E	G	G	P	N	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	V	K	G	Y	S	Y	T	D	A	N	I	N	K	N	V	K	W	D	E	D	S	M	S	E	Y	L	T	N	P	K	K	Y
Query Conservation
Alig confidence																																.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	Q	I	D	A	A	L	A	Q	Q	G	E	Q	L	F	N	T	Y	C	T	A	C	H	R	L	D	E	R	F	.	.	.	I	G	P	A	L	R	D	V	T	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	P	V	Y	I	M	N	V	M	L	N	P	N	G	M
Template Known Secondary structure			S	S																	T	T	T	T			S	S	S		S	.	.	.	S	S				T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.																					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	K	M	A	F	A	G	L	K	K	E	K	D	R	N	D	L	I	T	Y	M	T	K	A	A	K
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																									.
Template Sequence		I	Q	R	H	P	V	M	K	Q	L	V	Q	E	Y	G	T	M	M	T	D	M	A	L	.	S	E	E	Q	A	R	A	I	L	E	Y	L	R	Q	V	A	E
Template Known Secondary structure																	S								.
Template Predicted Secondary structure																									.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions