Return to main results Retrieve Phyre Job Id

Job DescriptionP00045
Confidence99.36%DateMon Jul 2 19:10:25 BST 2012
Rank73Aligned Residues76
% Identity25%Templatec2zxyA_
PDB info PDB header:oxygen binding, transport proteinChain: A: PDB Molecule:cytochrome c552; PDBTitle: crystal structure of cytochrome c555 from aquifex aeolicus
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20... ......30.........40.........50.........60.........70.........80.......
Predicted Secondary structure  .













































.....
Query SS confidence 









.































































. . . . .
Query Sequence  KKGATLFKTR. CQQCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTNPKKYIPG. . . . .
Query Conservation    
  

   .
  

     
    

 
                               
      
     
.....
Alig confidence 









.










...














..................
















.....
Template Conservation 
 
  

    
  

   
  ... 

 
          ..................       
              
Template Sequence  ADGKAIFQQKGCGSCHQANVDT. . . VGPSLKKIAQAYAGK. . . . . . . . . . . . . . . . . . EDQLIKFLKGEAPAIVDPAKEA
Template Known Secondary structure 

TTGGGT

SSS
S...SS

TTT
..................TT
S

SS
GGG
Template Predicted Secondary structure 










...








..................







Template SS confidence 















































































   1........10.........20.. .......30....... ..40.........50.........
 
   88.90.........100.........110
Predicted Secondary structure  ...









Query SS confidence  . . .






















Query Sequence  . . . TKMAFAGLKKEKDRNDLITYMTK
Query Conservation  ...  

    

  
  





 
Alig confidence  ...






















Template Conservation             


 

  

 

 
Template Sequence  IMKPQLTMLKGLSDAELKALADFILS
Template Known Secondary structure  GGGGGGGGG

T
Template Predicted Secondary structure 












Template SS confidence 

























   60.........70.........80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions