Job Description P00045 Confidence 99.81% Date Mon Jul 2 19:10:25 BST 2012 Rank 21 Aligned Residues 101 % Identity 23% Template c2yevB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:cytochrome c oxidase subunit 2; PDBTitle: structure of caa3-type cytochrome oxidase Resolution 2.36 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		M	A	K	E	S	T	G	F	K	P	G	S	A	K	K	G	A	T	L	F	K	T	R	C	Q	Q	C	H	T	I	E	E	G	G	.	P	N	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	V	K	G	Y	S	Y	T	D	A	N	I	N	K	N	V	K	W	D	E	D	S	M	S	E	Y	L	T
Query Conservation																																				.
Alig confidence																																				.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	A	A	K	A	S	P	A	P	V	A	D	E	R	G	Q	Q	V	F	Q	Q	N	C	A	A	C	H	G	V	A	R	S	M	P	P	A	V	I	G	P	E	L	G	L	W	G	N	R	T	S	L	G	.	.	.	.	.	.	.	.	.	.	.	A	G	I	V	E	N	T	P	E	N	L	K	A	W	I	R
Template Known Secondary structure								S					S												T	T	T	T				S	S	S			S	S			S				T	T	G	G	G		S			T	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.												.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	K	K	Y	I	P	G	T	K	M	A	F	A	G	L	K	K	E	K	D	R	N	D	L	I	T	Y	M	T	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	A	G	M	K	P	G	V	K	M	P	G	F	P	Q	L	S	E	E	D	L	D	A	L	V	R	Y	L	E	G	L	K
Template Known Secondary structure			G	G	G	T	S	T	T		S	S				T	T	S																S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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