Return to main results Retrieve Phyre Job Id

Job DescriptionO94742
Confidence8.90%DateMon Jul 2 19:10:25 BST 2012
Rank21Aligned Residues14
% Identity36%Templatec3dnoC_
PDB info PDB header:viral proteinChain: C: PDB Molecule:hiv-1 envelope glycoprotein gp120; PDBTitle: molecular structure for the hiv-1 gp120 trimer in the cd4-2 bound state
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.....
Predicted Secondary structure 
Query SS confidence 













Query Sequence  DFTNELKAELDRYK
Query Conservation 


 


 

 
  
Alig confidence 













Template Conservation     
 

 

  

Template Sequence  DMRDNWRSELYKYK
Template Known Secondary structure 
TTT

Template Predicted Secondary structure 

Template SS confidence 













   474.....480.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions