Return to main results Retrieve Phyre Job Id

Job DescriptionO13578
Confidence6.79%DateMon Jul 2 19:10:19 BST 2012
Rank9Aligned Residues56
% Identity16%Templatec2bgcA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.... .....50.........60.........70.........80.........90..
Predicted Secondary structure 






.







Query SS confidence 








.















































Query Sequence  EWCGTTRPG. LARQKRTQHASSVISKSGVLSAKPSSVFLALLAGKLAEKYIYARMLLF
Query Conservation 








.















































Alig confidence 








.



































.










Template Conservation    




 
 


 
  
   


      
 
 
   
   
  
.           
Template Sequence  YSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKL. DEWFYLAPATW
Template Known Secondary structure  TT


TTSTTS

.

Template Predicted Secondary structure 









.





Template SS confidence 

























































   176...180.........190.........200.........210.........220. ........230..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions