Job Description O13539 Confidence 10.89% Date Mon Jul 2 19:10:10 BST 2012 Rank 36 Aligned Residues 113 % Identity 13% Template d1gs9a_ SCOP info Four-helical up-and-down bundle Apolipoprotein Apolipoprotein Resolution 1.7

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.
Predicted Secondary structure																								.	.	.																																														.	.	.	.	.
Query SS confidence																								.	.	.																																														.	.	.	.	.
Query Sequence		P	K	S	I	S	E	Y	Y	S	T	F	E	H	L	N	R	D	T	L	R	Y	I	.	.	.	N	L	L	K	R	L	S	V	D	L	A	K	Q	V	E	V	S	D	P	S	V	T	V	Y	E	M	D	K	W	V	P	S	E	K	L	Q	G	I	L	E	Q	Y	C	A	P	.	.	.	.	.	D	T	D	I	R
Query Conservation																								.	.	.																																														.	.	.	.	.
Alig confidence																								.	.	.																																														.	.	.	.	.
Template Conservation
Template Sequence		L	G	R	F	W	D	Y	L	R	W	V	Q	T	L	S	E	Q	V	Q	E	E	L	L	S	S	Q	V	T	Q	E	L	R	A	L	M	D	E	T	M	K	E	L	K	A	Y	K	S	E	L	E	E	Q	L	T	P	V	A	E	E	T	R	A	R	L	S	K	E	L	Q	A	A	Q	A	R	L	G	A	D	M	E
Template Known Secondary structure																									S	S																									T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	A	Q	I	K	N	Y	L	D	Q	I	K	M	A	R	A	K	F	G	L	E	N	K	Y	S	L	K	E	R	L	S	T	L	T	K	E	L	N	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	R	G	R	L	V	Q	Y	R	G	E	V	Q	A	M	L	G	Q	S	T	E	E	L	R	V	R	L	A	S	H	L	R	K	L	R	K	R	L	L	R
Template Known Secondary structure																T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions