Job Description O13539 Confidence 9.96% Date Mon Jul 2 19:10:10 BST 2012 Rank 41 Aligned Residues 56 % Identity 29% Template c2v4hA_ PDB info PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex Resolution 2.9 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		E	K	L	Q	G	I	L	E	Q	Y	C	A	P	D	T	D	I	R	G	V	D	A	Q	I	K	N	Y	L	D	Q	I	K	M	A	R	A	.	.	.	K	F	G	L	E	N	K	Y	S	L	K	E	R	L	S	T	L	T	K	E	L
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.									.
Template Conservation																																																	.
Template Sequence		D	K	L	K	E	E	A	E	Q	H	K	I	V	M	E	T	V	P	V	L	K	A	Q	A	D	I	Y	K	A	D	F	Q	A	E	R	H	A	R	E	K	L	V	E	K	K	E	Y	.	L	Q	E	Q	L	E	Q	L	Q	R	E	F
Template Known Secondary structure																T																																	.
Template Predicted Secondary structure																																																	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions