Job Description D6VTK4 Confidence 5.08% Date Mon Jul 2 19:10:02 BST 2012 Rank 39 Aligned Residues 45 % Identity 18% Template d1oy3c_ SCOP info Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	S	E	T	A	D	D	I	E	K	N	Q	F	Y	Q	L	P	T	P	T	S	S	K	N	T	R	I	G	P	F	A	D	A	S	Y	K	E	G	E	V	E	P	V	D	M	Y	T	P	D	T	A	A	D	E	E	A	R	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	A	D	P	S	L	Q	A	P	V	R	V	S	M	Q	L	R	R	P	S	D	R	E	L	S	E	P	M	E	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	D	T	D	D	R	H	R	I	E	E
Template Known Secondary structure				S		T	T			S											T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.															.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions