Job Description D6VTK4 Confidence 3.99% Date Mon Jul 2 19:10:02 BST 2012 Rank 77 Aligned Residues 42 % Identity 21% Template d1iknc_ SCOP info Immunoglobulin-like beta-sandwich E set domains NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	S	E	T	A	D	D	I	E	K	N	Q	F	Y	Q	L	P	T	P	T	S	S	K	N	T	R	I	G	P	F	A	D	A	S	Y	K	E	G	E	V	E	P	V	D	M	Y	T	P	D	T	A	A	D	E	E
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	K	D	V	N	I	T	K	P	A	S	V	F	V	Q	L	R	R	K	S	D	L	E	T	S	E	P	K	P	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	P	E	I	K	D	K	E	E
Template Known Secondary structure				S		T	T		S	S											T	T	T			B								.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.															.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions