Job Description D6VTK4 Confidence 3.76% Date Mon Jul 2 19:10:02 BST 2012 Rank 89 Aligned Residues 82 % Identity 11% Template c4ainB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of betp with asymmetric protomers. Resolution 3.10 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		I	G	L	M	L	T	S	I	S	F	T	L	G	I	A	T	V	T	M	Y	F	V	S	A	V	K	G	M	I	.	V	T	Y	N	D	V	S	A	T	Q	D	K	Y	F	N	A	S	T	I	L	L	A	S	S	I	N	F	M	S	F	V	L	V	V	K	L	I	L	A	I	R	S	R	R	F	L	G	L	K	Q
Query Conservation																															.
Alig confidence																															.																				.	.	.	.	.	.	.	.																					.
Template Conservation																																																			.	.	.	.	.	.	.	.																					.
Template Sequence		W	S	V	I	V	P	A	L	V	I	V	L	A	T	V	V	W	G	I	G	F	K	D	S	F	T	N	F	A	S	S	A	L	S	A	V	V	D	N	L	G	W	A	F	I	L	F	G	T	.	.	.	.	.	.	.	.	V	F	V	F	F	I	V	V	I	A	A	S	K	F	G	T	I	R	L	G	.	R	E
Template Known Secondary structure																						S																													.	.	.	.	.	.	.	.												S	G	G	G	G			S		.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.																					.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130
		241	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	S	F	H	I	L	L	I	M	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	T	V	S	W	I	S	M	M	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions