Return to main results Retrieve Phyre Job Id

Job DescriptionD6VTK4
Confidence3.77%DateMon Jul 2 19:10:02 BST 2012
Rank88Aligned Residues17
% Identity24%Templatec1skhA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:major prion protein 2; PDBTitle: n-terminal (1-30) of bovine prion protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70 .........
Predicted Secondary structure  ...





Query SS confidence 







. . .








Query Sequence  ALTLIVMW. . . MTSRSRKTP
Query Conservation   





 ...







 
Alig confidence 







...








Template Conservation 





 


 








Template Sequence  LVLFVAMWSDVGLCKKRPKP
Template Known Secondary structure  TTSSS



Template Predicted Secondary structure 






Template SS confidence 



















   11........20.........30
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions