Job Description O13587 Confidence 3.99% Date Mon Jul 2 19:10:21 BST 2012 Rank 19 Aligned Residues 41 % Identity 15% Template c1d4uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:nucleotide excision repair protein xpa (xpa-mbd); PDBTitle: interactions of human nucleotide excision repair protein2 xpa with rpa70 and dna: chemical shift mapping and 15n nmr3 relaxation studies Resolution UNK

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		7	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		V	S	I	K	N	P	R	P	S	R	.	P	F	S	C	F	W	R	K	G	D	V	E	N	I	R	K	S	D	I	G	N	E	K	K	I	D	A	K	F	N	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		I	V	K	K	N	P	H	H	S	Q	W	G	D	M	K	L	Y	L	K	L	Q	I	V	K	R	S	L	E	V	W	G	S	Q	E	A	L	E	E	A	K	E	V
Template Known Secondary structure				S	S		S	S	S				S																		T	S	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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