 |
| Job Description | O13556 | | Confidence | 6.23% | Date | Mon Jul 2 19:10:14 BST 2012 |
| Rank | 21 | Aligned Residues | 42 |
| % Identity | 12% | Template | c3d12E_ |
| PDB info |
PDB header:hydrolase/membrane protein | Chain: E: PDB Molecule:ephrin-b3; |
PDBTitle: crystal structures of nipah virus g attachment glycoprotein in complex2 with its receptor ephrin-b3
|
| Resolution | 3.00 Å |
|
|   |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | S | I | T | L | F | E | S | I | P | T | E | V | R | S | F | Y | E | D | E | . |
. |
. |
K | S | G | L | I | K | V | V | K | F | R | T | G | A | M | D | R | K | R | S | F | E |
| Query Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
| . | . | . |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |
|   |
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |   |
|
|
|   |
|   |
| Template Sequence |   |
P | N | L | W | G | H | E | F | R | S | H | H | D | Y | Y | I | I | A | T | S | D | G | T | R | E | G | L | E | S | L | Q | G | G | V | C | L | T | R | G | M | K | V | L | L | R |
| Template Known Secondary structure |   |
S |
| S | S |
|
|
|
|
| T | T |
|  |  |  |  |  |  |
| S |
| B | S | S | S | T | T | S |
|
| B | S | S |  |  |  |  | T |
|
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|