Job Description O75012 Confidence 6.86% Date Mon Jul 2 19:10:23 BST 2012 Rank 41 Aligned Residues 51 % Identity 20% Template c1l6nA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal 283-residue fragment of the hiv-2 1 gag polyprotein Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		R	L	P	P	L	P	R	L	K	V	K	K	P	I	I	R	Q	E	A	N	K	C	L	V	L	M	S	N	L	L	Q	C	W	S	S	Y	G	.	.	.	H	M	S	P	K	C	A	G	L	V	T	E	L	K
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		E	L	D	K	W	E	K	I	R	L	R	P	G	G	K	K	Q	Y	K	L	K	H	I	V	W	A	S	R	E	L	E	R	F	A	V	N	P	G	L	L	E	T	S	E	G	C	R	Q	I	L	G	Q	L	Q
Template Known Secondary structure							S	S	S	B		S	T	T	T			B																T	T	S		G	G	G	T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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