05/07/2012 00:20:38 : INFO  : Run start: Thu Jul  5 00:20:38 BST 2012
05/07/2012 00:20:38 : INFO  : Initialised job
05/07/2012 00:20:38 : INFO  : Initialised job:
Sequence
>batch____
MSGKPPVYRLPPLPRLKVKKPIIRQEANKCLVLMSNLLQCWSSYGHMSPKCAGLVTELKS
CTSESALGKRNNVQKSNINYHAARLYDRINGKPHD

05/07/2012 00:20:39 : INFO  : Checked sequence
05/07/2012 00:20:43 : INFO  : Finding homologues with PSI-BLAST
05/07/2012 00:20:43 : INFO  : PSI-BLAST 3 iterations
05/07/2012 00:21:22 : INFO  : PSI-BLAST 5 iterations
05/07/2012 00:22:01 : INFO  : Finished PSI-BLAST
05/07/2012 00:22:03 : INFO  : Running Buildali to generate a3m file
05/07/2012 00:23:49 : INFO  : Converting to HMM
05/07/2012 00:23:49 : INFO  : Calibrating HMM
05/07/2012 00:23:52 : INFO  : Searching HMM database
05/07/2012 00:25:40 : INFO  : Finished buildali
05/07/2012 00:25:40 : INFO  : Predicting secondary structure
05/07/2012 00:25:40 : INFO  : Predicted secondary structure (PSI-Pred)
05/07/2012 00:25:40 : INFO  : Predicting Disordered regions
05/07/2012 00:25:40 : INFO  : Predicted Disorder (Disopred)
05/07/2012 00:25:40 : INFO  : Running memsat_svm check
05/07/2012 00:26:18 : INFO  : Globular protein
05/07/2012 00:26:18 : INFO  : Predicted Transmembrane (memsat_svm) ID '1312447d8ae6db08'
05/07/2012 00:26:19 : INFO  : Initialising fold library search
05/07/2012 00:26:19 : INFO  : Initialised search input
05/07/2012 00:26:19 : INFO  : Building Ensemble models
05/07/2012 00:26:19 : INFO  : Building hh.c1ei0A_.model.1.pdb
05/07/2012 00:26:20 : INFO  : Building hh.d2hp8a_.model.2.pdb
05/07/2012 00:26:20 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/1312447d8ae6db08/hh.d2hp8a_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/1312447d8ae6db08/d2hp8a_.2.pdb
05/07/2012 00:26:20 : INFO  : Building c1ei0A_.1.pdb
05/07/2012 00:26:21 : INFO  : Building d2hp8a_.2.pdb
05/07/2012 00:26:21 : INFO  : Building c2k3jA_.3.pdb
05/07/2012 00:26:22 : INFO  : Building d1u97a_.4.pdb
05/07/2012 00:26:22 : INFO  : Building c2rnbA_.5.pdb
05/07/2012 00:26:23 : INFO  : Building d2db7a1.6.pdb
05/07/2012 00:26:24 : INFO  : Building c3qp5C_.7.pdb
05/07/2012 00:26:26 : INFO  : Building d1yioa1.8.pdb
05/07/2012 00:26:29 : INFO  : Building c1h0mD_.9.pdb
05/07/2012 00:26:29 : INFO  : Building c1zljE_.10.pdb
05/07/2012 00:26:30 : INFO  : Building c2q0oA_.11.pdb
05/07/2012 00:26:34 : INFO  : Building d1ppjh_.12.pdb
05/07/2012 00:26:36 : INFO  : Building d1fsea_.13.pdb
05/07/2012 00:26:38 : INFO  : Building d1a04a1.14.pdb
05/07/2012 00:26:38 : INFO  : Building d1l0lh_.15.pdb
05/07/2012 00:26:39 : INFO  : Building c3sztB_.16.pdb
05/07/2012 00:26:40 : INFO  : Building c2jpcA_.17.pdb
05/07/2012 00:26:41 : INFO  : Building d1p4wa_.18.pdb
05/07/2012 00:26:42 : INFO  : Building c3u1dA_.19.pdb
05/07/2012 00:26:42 : INFO  : Building c3cloC_.20.pdb
05/07/2012 00:26:44 : INFO  : Finished HH model building
05/07/2012 00:26:44 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
05/07/2012 00:26:55 : INFO  : html domain output complete ID '1312447d8ae6db08'
05/07/2012 00:28:50 : INFO  : Run end  : Thu Jul  5 00:28:50 BST 2012
