Return to main results Retrieve Phyre Job Id

Job DescriptionO14468
Confidence4.99%DateMon Jul 2 19:10:22 BST 2012
Rank31Aligned Residues18
% Identity28%Templated2foka1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Restriction endonuclease FokI, N-terminal (recognition) domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40........
Predicted Secondary structure 
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Query Sequence  NIVTVFDLANEIEKSLKD
Query Conservation    



 
  

 
 


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Template Conservation 





   
     
  
Template Sequence  RVVQVFDRNSKVHNEVKN
Template Known Secondary structure  TTS
TTS
Template Predicted Secondary structure 



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   22.......30.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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