Job Description O13559 Confidence 99.56% Date Mon Jul 2 19:10:15 BST 2012 Rank 109 Aligned Residues 162 % Identity 13% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.					.	.	.	.	.	.
Predicted Secondary structure																																																.	.																							.	.	.	.
Query SS confidence																																																.	.																							.	.	.	.
Query Sequence		H	Q	L	R	L	C	H	E	I	Y	M	A	D	T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	Y	.	.	V	S	F	L	F	V	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C	.	.	.	.	G	C	L	N	V	A
Query Conservation																																																.	.																							.	.	.	.
Alig confidence															.	.																																.	.																							.	.	.	.
Template Conservation															.	.
Template Sequence		F	E	S	E	I	L	E	A	I	S	Q	N	S	.	.	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A	E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R	G	E	E	P	G	K	S	C	G
Template Known Secondary structure		G												S	.	.								T	T	S	S																T	T		G	G	G								S	S														T	T	T			T	T	S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	V	R	N	F	I	E	E	G	C	D	G	V	T	D	L	Y	V	G	I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	Q	S	Q	F	G	G	I	T	N	L	D	.
Query Conservation																																																																																	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																		.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		Y	S	V	R	F	E	S	I	L	P	R	P	H	A	S	I	X	F	C	T	V	G	V	L	L	R	K	L	E	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	I	S	H	V	I	V	D	E	I	H	.	.	E	R	D	I	N	T	D	F	L	L	V	V	L	R	D	V	V	Q
Template Known Secondary structure					T	T							S	S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									T	T	.	.	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.																	.	.	.	.	.	.	.	510	.	.	.	.			.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	A	F	E	K	A	I	F	L	S	G	T	A	P	E	A	V	A	D	A	A	L	Q	R	I	G	L	T	G	L	A
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		A	Y	P	E	V	R	I	V	L	X	S	A	T	I	.	.	.	D	T	S	X	F	C	E	Y	F	F	N	C	P	I	I
Template Known Secondary structure				T	T	S							S	S	S	.	.	.									T	T	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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