Job Description O13559 Confidence 95.89% Date Mon Jul 2 19:10:15 BST 2012 Rank 170 Aligned Residues 137 % Identity 11% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		A	D	T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	Y	V	S	F	L	F	V	.	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C	G	C	L	N	V	A	P	V	R	N	F	I	E	E	G	C	D	G	V	T	D	L
Query Conservation																																											.
Alig confidence																																			.	.							.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	.	.	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S										T	T	S																T	T			.	.									S																T									.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.						.	.	.	.	.	540
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		Y	V	G	I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	Q	S	Q	F	G	G	I	T	N	L	D	F	D	A	F	E	K	.	.	.	.	.	A	I	F	L	S	G
Query Conservation																																																																							.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S										S	S																		T	T	S	T	T			S								G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	E	A	V	A	D	A	A	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	G	L	N	M	L	P	Q	A	R	E	F
Template Known Secondary structure		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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