Job Description O13559 Confidence 99.58% Date Mon Jul 2 19:10:15 BST 2012 Rank 106 Aligned Residues 132 % Identity 21% Template c2kbfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of carboxyl-terminal domain of dbp5p Resolution UNK

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		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	Q	P	E	E	A	L	K	L	L	L	A	L	F	E	I	E	P	E	S	K	A	I	V	V	A	S	T	T	N	E	V	E	E	L	A	C	S	W	.	R	K	Y	F	R	V	V	W	I	H	G	K	L	G	A	A	E	K	V	S	R	T	K	E	F	V	T	D	G	S	M	R	V	L	I	G	T	K	L	V
Query Conservation																																									.
Alig confidence																																									.																										.
Template Conservation																																																																			.
Template Sequence		K	N	E	A	D	K	F	D	V	L	T	E	L	Y	G	L	M	T	I	G	S	S	I	I	F	V	A	T	K	K	T	A	N	V	L	Y	G	K	L	K	S	E	G	H	E	V	S	I	L	H	G	D	L	Q	T	Q	E	R	D	R	L	I	D	D	F	.	R	E	G	R	S	K	V	L	I	T	T	N	V	L
Template Known Secondary structure		S	S													T	T	S			S							S															T	T	S						S	S		S													.		T	T	T							S	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.							.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.				.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure																				.	.	.	.	.	.																	.	.	.
Query SS confidence																				.	.	.	.	.	.																	.	.	.
Query Sequence		T	E	G	I	D	I	K	Q	L	M	M	V	I	M	L	D	N	R	.	.	.	.	.	.	L	N	I	I	E	L	I	Q	G	V	G	R	L	R	D	G	.	.	.	G	L	C	Y	L	L	S	R	K	N	S	W	A	A	R	N	R	K	G	E
Query Conservation																				.	.	.	.	.	.																	.	.	.
Alig confidence																				.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		A	R	G	I	D	I	P	T	V	S	M	V	V	N	Y	D	L	P	T	L	A	N	G	Q	A	D	P	A	T	Y	I	H	R	I	G	R	T	G	R	F	G	R	K	G	V	A	I	S	F	V	H	D	K	N	S	F	N	I	L	S	A	I	Q
Template Known Secondary structure			G	G	G		S				S					S	S					S	S	S	S												T		S	S		S	S										S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions