 |
| Job Description | O13559 | | Confidence | 73.55% | Date | Mon Jul 2 19:10:15 BST 2012 |
| Rank | 340 | Aligned Residues | 42 |
| % Identity | 14% | Template | c2dflA_ |
| PDB info |
PDB header:recombination | Chain: A: PDB Molecule:dna repair and recombination protein rada; |
PDBTitle: crystal structure of left-handed rada filament
|
| Resolution | 2.90 Å |
|
|   |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | |
|
|
420 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | A | D | T | P | S | V | A | V | Q | A | P | P | G | Y | G | K | T | E | L | F | H | L | P | L | I | A | L | A | S | K | G | D | V | . |
. |
. |
K | Y | V | S | F | L | F | V |
| Query Conservation |   |
  |
|
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   | . | . | . |   |   |
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |
|   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| Template Sequence |   |
I | E | T | R | T | M | T | E | F | F | G | E | F | G | S | G | K | T | Q | L | C | H | Q | L | S | V | N | V | Q | L | P | P | E | K | G | G | L | S | G | K | A | V | Y | I | D |
| Template Known Secondary structure |   |
B |
| T | T | S |  |  |  |  |  |  | S | T | T | S | S | T | T |  |  |  |  |  |  |  |  |  | S | S | S |
| G | G | G | T | S |
| S |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|