Job Description O13559 Confidence 82.82% Date Mon Jul 2 19:10:15 BST 2012 Rank 265 Aligned Residues 110 % Identity 15% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	Y	V	S	F	L	F	V	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C	G	C	L	N	V	A	P	V	R	N	F	I	E	E	G	C	D	G	V	T	D	L	Y	V	G
Query Conservation
Alig confidence																																	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	I	E	F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	D	V	K	.	.	.	Y	L	V	F	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	D	T	R	S	I	R	N	I	Q	S	R	T	G	T	S	L	P	S	V	E	V	E
Template Known Secondary structure										S	T	T	S																T	T			.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G		S	S								S	S						S
Template Predicted Secondary structure																																	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.																	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	Q	S	Q	F	G	G	I	T	N	L	D	F	D	A	F	E	K	A	I	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		S	A	P	E	I	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	M	S	N	S	F	N	D	E	T	K	V	I	G	I	D	E	V	Q	.	.	.	.	.	.	F	F	D	D	R	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I
Template Known Secondary structure		S	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T	S		T	T								S	G	G	.	.	.	.	.	.	G	S		T												T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions