Job Description O13559 Confidence 99.92% Date Mon Jul 2 19:10:15 BST 2012 Rank 51 Aligned Residues 375 % Identity 18% Template c1z3iX_ PDB info PDB header:recombination/dna binding Chain: X: PDB Molecule:similar to rad54-like; PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54 Resolution 3.00 Å

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		375	.	.	.	.	380	.	.	.	.								.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420					.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																					.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																																					.	.	.	.
Query Sequence		L	H	Q	L	R	L	C	H	E	I	.	.	.	.	.	.	.	Y	M	A	D	T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	.	.	.	.	Y	V	S	F	L	F	V	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C
Query Conservation												.	.	.	.	.	.	.																																					.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																					.	.	.	.									.
Template Conservation																																																																			.
Template Sequence		P	H	Q	R	E	G	V	K	F	L	W	D	C	V	T	G	R	R	I	E	N	S	Y	G	C	I	M	A	D	E	M	G	L	G	K	T	L	Q	C	I	T	L	I	W	T	L	L	K	Q	S	P	D	C	K	P	E	I	D	K	V	I	V	V	S	P	.	S	S	L	V	R	N	W	Y	N	E	V	G	K	W
Template Known Secondary structure																T	T	S	S	S	T	T										T	T	S																		T	T	S	S		S		S								.
Template Predicted Secondary structure																																																																			.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	L	N	V	A	P	V	R	N	F	I	E	E	G	C	D	G	V	T	D	L	Y	V	G	I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	Q	S	Q	F	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	G	R	V	Q	P	V	A	I	D	G	G	S	K	D	E	I	D	S	K	L	V	N	F	I	S	Q	Q	G	M	R	I	P	T	P	I	L	I	I	S	Y	E	T	F	R	L	H	A	E	V	L	H	K	G	K	V	G	L	V	I	C	D	E	G	H	R	L	K	N	S	D	N	Q	T	Y	L	A	L	N
Template Known Secondary structure			G	G	G								S	S																	S	S			S															T	T	T	T	T	T	S								T	T	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.																																		.	.	.	.	.	.	.	570
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	N	L	D	F	D	A	F	E	K	A	I	F	L	S	G	T	A	P	E	A	V	A	D	A	A	L	Q	R	I	G	L	T	G	L	A	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	D	I	N	E	L	K
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		S	M	.	.	.	.	.	N	A	Q	R	R	V	L	I	S	G	T	P	I	Q	N	D	L	L	E	Y	F	S	L	V	H	F	V	N	S	G	I	L	G	T	A	Q	E	F	K	K	R	F	E	I	P	I	L	K	G	R	D	A	D	A	S	D	K	D	R	A	A	G	E	Q	K	L	Q	E	L	I	S	I	V
Template Known Secondary structure				.	.	.	.	.			S							S	S		S	G	G	G	G	G	G																							T									S	T	T			S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		308	.						310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	E	D	L	S	R	G	L	S	S	Y	P	T	R	M	F	N	L	I	K	E	K	S	E	V	P	L	G	H	V	H	K	I	W	K	K	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	R	C	L	I	R	R	T	S	D	I	L	S	K	Y	L	P	V	K	I	E	Q	V	V	C	C	N	L	T	P	L	Q	K	E	L	Y	K	L	F	L	K	Q	A	K	P	V	E	S	L	Q	T	G	K	I	S	V	S	S	L	S	S	I	T	S	L	K	K	L	C	N	H	P	A	L	I	Y	E	K	C	L
Template Known Secondary structure										G	G	G	G	G	G	T	S																													G	G	G	S	S		T	T																				T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
																												610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	P	E	E	A	L	K	L	L	L	A	L	F	E	I	E	P	E	S	K	A	I	V	V	A	S	T	T	N	E	V	E	E	L	A	C	S	W	.	R	K	Y	F	R	V	V	W	I	H	G	K	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		T	G	E	E	G	F	D	G	A	L	D	L	F	P	Q	N	Y	S	T	K	A	V	E	P	Q	L	S	G	K	M	L	V	L	D	Y	I	L	A	M	T	R	T	T	T	S	D	K	V	V	L	V	S	N	Y	T	Q	T	L	D	L	F	E	K	L	C	R	N	R	R	Y	L	Y	V	R	L	D	G	T	M	S
Template Known Secondary structure			T		T	T		T	T	G	G	G	T	S		S	S			S	S	S			G	G	G	S																										S																T								S	S
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
		663	.	.	.	.	.	.	670	.	.	.	.	.			.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.		720	.	.			.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																													.				.	.
Query SS confidence															.	.																																													.				.	.
Query Sequence		A	A	E	K	V	S	R	T	K	E	F	V	T	.	.	D	G	S	M	R	V	L	I	G	T	K	L	V	T	E	G	I	D	I	K	Q	L	M	M	V	I	M	L	D	N	R	L	N	I	I	E	L	I	Q	G	V	G	R	L	.	R	D	G	.	.	G	L	C	Y	L	L	S	R	K	N	S	W	A	A	R
Query Conservation															.	.																																													.				.	.
Alig confidence															.	.																																													.				.	.
Template Conservation
Template Sequence		I	K	K	R	A	K	I	V	E	R	F	N	N	P	S	S	P	E	F	I	F	M	L	S	S	K	A	G	G	C	G	L	N	L	I	G	A	N	R	L	V	M	F	D	P	D	W	N	P	A	N	D	E	Q	A	M	A	R	V	W	R	D	G	Q	K	K	T	C	Y	I	Y	R	L	L	S	T	G	T	I	E
Template Known Secondary structure														S	T	T										G	G	G	S		T	T				T	T								S			S	S									T	T	S	S	S	T	T			S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	K	G	E	L	P	P	I	K	E	G	C	I	T	E	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	L	Q	R	Q	A	H	K	K	A	L	S	S	C	V	V
Template Known Secondary structure														T	S
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640