Job Description O13559 Confidence 85.07% Date Mon Jul 2 19:10:15 BST 2012 Rank 247 Aligned Residues 122 % Identity 18% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	Y	V	S	F	L	F	V	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C	G	C	L	N	V	A	P	V	R	N	F	I	E	E	G	C	D	G	V	T	D	L
Query Conservation
Alig confidence																																				.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	Q	A	Q	K	A	G	G	T	.	.	.	C	A	F	I	D	A	E	H	A	L	D	P	.	.	.	V	Y	A	R	A	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	D	E	L
Template Known Secondary structure				T	T	S							S	T	T	S	S															T	T			.	.	.						S	S						.	.	.						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																																				.	.	.													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.																.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.									.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.
Query Sequence		Y	V	G	I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	Q	.	.	.	.	.	.	.	.	S	Q	F	G	G	I	T	N	L	D	F	D	A	F	E	K	A	I	F
Query Conservation																																																							.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	S	Q	P	D	N	G	E	Q	A	.	.	.	.	.	.	.	.	.	.	.	L	E	I	M	E	L	L	V	R	S	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	G	L	Q	A	R	L	M	S	Q	A	L	R	K	L	T	A	I	L	S	K	T	G	T	A	A	I	F
Template Known Secondary structure							S	S					.	.	.	.	.	.	.	.	.	.	.									T	T	T			S							T	T	T				S	T	T																					T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		538	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		204	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions