Job Description O13559 Confidence 63.57% Date Mon Jul 2 19:10:15 BST 2012 Rank 436 Aligned Residues 142 % Identity 8% Template c1q57G_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna primase/helicase; PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7 Resolution 3.45 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.								.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																																								.																		.	.	.	.	.	.	.
Query SS confidence																																								.																		.	.	.	.	.	.	.
Query Sequence		T	P	S	V	A	V	Q	A	P	P	G	Y	G	K	T	E	L	F	H	L	P	L	I	A	L	A	S	K	G	D	V	K	Y	V	S	F	L	F	.	V	P	Y	T	V	L	L	A	N	C	M	I	R	L	S	R	C	.	.	.	.	.	.	.	G	C	L	N	V	A	P	V	R	N	F	I	E	E	G	C	D
Query Conservation																																								.																		.	.	.	.	.	.	.
Alig confidence																																								.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	V	I	M	V	T	S	G	S	G	M	V	M	S	T	F	V	R	Q	Q	A	L	Q	W	G	T	A	M	G	K	K	V	G	L	A	M	L	E	E	S	V	E	E	T	A	E	D	L	I	G	L	H	N	R	V	R	L	R	Q	S	D	S	L	K	R	E	I	I	E	N	G	K	F	D	Q	W	F	D	E
Template Known Secondary structure		T								S	S		S														T	T	T	S									T	T	S														T	T	S			T	T											T	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.								.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		G	V	T	D	L	Y	V	G	I	Y	D	D	L	A	S	T	N	F	T	D	R	I	A	A	W	E	N	I	V	E	C	T	F	R	T	N	N	V	K	L	G	Y	L	I	V	D	E	F	H	N	F	E	T	E	V	Y	R	.	.	.	.	.	.	.	Q	S	Q	F	G	G	I	T	N	L	D	F	D	A	F	E
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.
Template Sequence		L	F	G	N	D	T	F	H	L	Y	D	S	F	E	T	D	R	L	L	A	K	L	A	Y	M	R	S	G	.	.	.	.	.	.	.	.	.	L	G	C	D	V	I	I	L	D	H	I	S	I	V	V	S	A	S	G	E	S	D	E	R	K	M	I	D	N	L	M	T	K	L	K	G	F	A	K	S	T	G	V
Template Known Secondary structure				T	T	T																							T	.	.	.	.	.	.	.	.	.	T			S							T	T				S			S																							T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.										.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		534	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	F	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	V	V	I	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions