Return to main results Retrieve Phyre Job Id

Job DescriptionO13577
Confidence1.81%DateMon Jul 2 19:10:19 BST 2012
Rank51Aligned Residues31
% Identity32%Templatec3bwrC_
PDB info PDB header:viral proteinChain: C: PDB Molecule:capsid protein vp1; PDBTitle: sv40 vp1 pentamer in complex with gm1 oligosaccharide
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110....
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Query Sequence  DYSSVIVPQFTRSPLPTANSLPPMLINQRTMSTEASSLEKWD
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Template Sequence  DKEQLPCYSVARIPLPN. . . . . . . . INEDLT. . . CGNILMWE
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   81........90....... ..100... ......110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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