 |
Job Description | O13577 | Confidence | 1.40% | Date | Mon Jul 2 19:10:19 BST 2012 |
Rank | 66 | Aligned Residues | 19 |
% Identity | 16% | Template | c3pltB_ |
PDB info |
PDB header:structural protein | Chain: B: PDB Molecule:sphingolipid long chain base-responsive protein lsp1; |
PDBTitle: crystal structure of lsp1 from saccharomyces cerevisiae
|
Resolution | 2.90 Å |
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | T | M | S | T | E | A | S | S | L | E | K | W | D | V | A | E | P |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
A | S | E | R | R | E | A | A | K | Q | L | S | L | W | G | A | D | N | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|