Job Description O13585 Confidence 98.29% Date Mon Jul 2 19:10:20 BST 2012 Rank 7 Aligned Residues 163 % Identity 18% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	W	D	D	A	R	I	E	D	R	T	V	D	K	P	V	G	S	S	H	A	Q	E	K	L	A	L	V	K	S	T	L	F	K	L	D	Q	E	D	R	P	E	C	D	S	W	V	Q	L	V	K	L	I	C	D	E	D	R	E	E	E	F	T	T	F	K	E	L	L	R	E	V	K	N	V	N	D	K
Query Conservation
Alig confidence							.																																									.	.	.	.	.	.
Template Conservation							.																																									.	.	.	.	.	.
Template Sequence		N	E	V	M	E	.	A	Q	L	P	S	H	G	G	P	K	P	S	A	E	S	D	M	G	T	R	R	D	Y	I	M	A	K	Y	V	E	H	R	F	A	R	R	C	T	E	P	.	.	.	.	.	.	Q	R	L	W	T	A	I	C	N	R	D	L	L	S	V	L	E	A	F	A	N	G	Q	D	F	G	Q	P
Template Known Secondary structure						T	.	T	T			S	T	T		S				T	T															T	T		T	T	S							.	.	.	.	.	.										T											T	T			T	T	S
Template Predicted Secondary structure							.																																									.	.	.	.	.	.
Template SS confidence
		503	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.							.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		82	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure									.	.	.	.	.	.										.	.	.
Query SS confidence									.	.	.	.	.	.										.	.	.
Query Sequence		S	V	T	G	V	A	L	.	.	.	.	.	.	I	H	Y	I	I	V	F	D	R	.	.	.	A	D	Y	I	E	L	L	H	D	N	P	S	G	A	K	L	D	L	N	L	V	D	D	I	V	G	Y	T	P	L	M	W	S	F	S	L	Q	R	R	N	C	C	L	E	L	F	N	A	F	D	E	I	N	F	N
Query Conservation									.	.	.	.	.	.										.	.	.
Alig confidence									.	.	.	.	.	.										.	.	.																				.	.	.	.	.	.																												.	.
Template Conservation																																														.	.	.	.	.	.																												.	.
Template Sequence		L	P	G	P	D	A	Q	A	P	E	E	L	V	L	H	L	A	V	K	V	A	N	Q	A	S	L	P	L	V	D	F	I	I	Q	N	G	G	H	L	D	A	K	A	D	.	.	.	.	.	.	G	N	T	A	L	H	Y	A	A	L	Y	N	Q	P	D	C	L	K	L	L	L	K	G	R	A	L	V	.	.	G
Template Known Secondary structure					S	S	S			S											T			T	T	T											T			T	T					.	.	.	.	.	.											T	T											T					.	.	S
Template Predicted Secondary structure																																														.	.	.	.	.	.																												.	.
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620							.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.			.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		M	T	N	K	A	G	L	T	A	W	D	M	V	P	P	.	.	Y	S	P	L	S	E	F	L	E	Q	N	N
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		T	V	N	E	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K	E	C	E	E	L	L	E	Q	A	Q
Template Known Secondary structure					T	T											T	T		T	T								T
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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