Job Description O13585 Confidence 97.46% Date Mon Jul 2 19:10:20 BST 2012 Rank 19 Aligned Residues 113 % Identity 20% Template c3deoA_ PDB info PDB header:protein transport, membrane protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43 Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	W	V	Q	L	V	K	L	I	C	D	E	D	R	E	E	E	F	T	T	F	K	E	L	L	R	E	V	K	N	V	N	D	K	S	V	T	G	V	A	L	I	H	Y	I	I	V	F	D	R	A	D	Y	I	E	L	L	H	D	N	P	S	G	A	K	L	D	L	N	L	V	D	D	I	V	G	Y	T	P
Query Conservation
Alig confidence																													.																																		.	.	.	.
Template Conservation																													.																																		.	.	.	.
Template Sequence		D	V	V	S	E	Y	E	T	P	W	W	T	A	A	R	K	A	D	E	Q	A	L	S	Q	L	L	E	.	D	R	D	V	D	A	V	D	E	N	G	R	T	A	L	L	F	V	A	G	L	G	S	D	K	C	V	R	L	L	A	E	A	.	.	.	.	G	A	D	L	D	H	R	D	M	R	G	G	L	T	A
Template Known Secondary structure																	T	T									T	T	.	T	S		T	T				T	T	S											T											T	.	.	.	.	T			T	T				S	S	S	S
Template Predicted Secondary structure																													.																																		.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	W	S	F	S	L	Q	R	R	N	C	C	L	E	L	F	N	A	F	D	E	I	N	F	N	M	T	N	K	A	G	L	T	A	W	D	M	V	P
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		L	H	M	A	A	G	Y	V	R	P	E	V	V	E	A	L	V	E	L	G	A	D	I	E	V	.	.	E	D	E	R	G	L	T	A	L	E	L	A	R
Template Known Secondary structure								T	T												T			T	T		.	.			T	T	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions