Job Description O13585 Confidence 84.45% Date Mon Jul 2 19:10:20 BST 2012 Rank 63 Aligned Residues 112 % Identity 23% Template c2jabC_ PDB info PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 Resolution 1.70 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	E	F	T	T	F	K	E	L	L	R	E	V	K	N	V	N	D	K	S	V	T	G	V	A	L	I	H	Y	I	I	V	F	D	R	A	D	Y	I	E	L	L	H	D	N	P	S	G	A	K	L	D	L	N	L	V	D	D	I	V	G	Y	T	P	L	M	W	S	F	S	L	Q	R	R	N	C	C	L
Query Conservation
Alig confidence																																																								.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		R	A	G	Q	D	D	E	V	R	I	L	M	A	N	G	A	D	V	N	A	K	D	E	Y	G	L	T	P	L	Y	L	A	T	A	H	G	H	L	E	I	V	E	V	L	L	K	N	G	A	D	V	N	A	V	.	.	.	.	.	D	A	I	G	F	T	P	L	H	L	A	A	F	I	G	H	L	E	I	A	E
Template Known Secondary structure				T											T	T			T	T				T	T	S											T											T	T			T	T			.	.	.	.	.		T	T												T
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		E	L	F	N	A	F	D	E	I	N	F	N	M	T	N	K	A	G	L	T	A	W	D	M	V	P	.	.	P	Y	S	P	L	S	E	F	L	E	Q	N	N
Query Conservation																												.	.
Alig confidence											.	.																.	.
Template Conservation											.	.
Template Sequence		V	L	L	K	H	G	A	D	V	.	.	N	A	Q	D	K	F	G	K	T	A	F	D	I	S	I	G	N	G	N	E	D	L	A	E	I	L	Q	K	L	N
Template Known Secondary structure						T	T			T	.	.	T				T	T	S										T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions