Job Description O13585 Confidence 98.49% Date Mon Jul 2 19:10:20 BST 2012 Rank 6 Aligned Residues 167 % Identity 15% Template c1dcqA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:pyk2-associated protein beta; PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta. Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	V	W	D	D	A	R	I	E	D	R	T	V	D	K	P	V	G	S	S	H	A	Q	E	K	L	A	L	V	K	S	T	L	F	K	L	D	Q	E	D	R	P	E	C	D	S	W	V	Q	L	V	K	L	I	C	D	E	D	R	E	E	E	F	T	T	F	K	E	L	L	R	E	V	K	N	V	N	D	K
Query Conservation
Alig confidence							.																																																	.
Template Conservation							.																																																	.
Template Sequence		N	E	I	M	E	.	C	C	L	P	S	E	D	P	V	K	P	N	P	G	S	D	M	I	A	R	K	D	Y	I	T	A	K	Y	M	E	R	R	Y	A	R	K	K	H	A	D	T	A	A	K	L	H	S	L	.	C	E	A	V	K	T	R	D	I	F	G	L	L	Q	A	Y	A	D	G	V	D	L	T	E	K
Template Known Secondary structure						T	.	T	T			S	S	S			S			T	T															T	T		T	T	S				S	S	S									.						T	T											T	T			T	T	S	B
Template Predicted Secondary structure							.																																																	.
Template SS confidence
		326	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
								82	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.															.	.	.
Query SS confidence		.	.	.	.	.	.															.	.	.
Query Sequence		.	.	.	.	.	.	S	V	T	G	V	A	L	I	H	Y	I	I	V	F	.	.	.	D	R	A	D	Y	I	E	L	L	H	D	N	P	S	G	A	K	L	D	L	N	L	V	D	D	I	V	G	Y	T	P	L	M	W	S	F	S	L	Q	R	R	N	C	C	L	E	L	F	N	A	F	D	E	I	N	F	N
Query Conservation		.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.																				.	.	.	.	.																															.	.
Template Conservation																																												.	.	.	.	.																															.	.
Template Sequence		I	P	L	A	N	G	H	E	P	D	E	T	A	L	H	L	A	V	R	S	V	D	R	T	S	L	H	I	V	D	F	L	V	Q	N	S	G	N	L	D	K	Q	.	.	.	.	.	T	G	K	G	S	T	A	L	H	Y	C	C	L	T	D	N	A	E	C	L	K	L	L	L	R	G	K	A	S	I	.	.	E
Template Known Secondary structure					S	S		S	S	T	T		B											T	T	T												S		T	T			.	.	.	.	.		T	T											T	T											T	T			T	.	.	T
Template Predicted Secondary structure																																												.	.	.	.	.																															.	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.						.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.			.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		M	T	N	K	A	G	L	T	A	W	D	M	V	P	P	.	.	Y	S	P	L	S	E	F	L	E	Q
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		I	A	N	E	S	G	E	T	P	L	D	I	A	K	R	L	K	H	E	H	C	E	E	L	L	T	Q
Template Known Secondary structure					T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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