PD2 ca2main

A server for reconstructing the backbone of Calpha proteins using Gaussian micture models. Please upload a single chain in PDB format.


Upload PDB file with missing (total or partial) backbone atoms:
 

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Perform energy minimisation
Add sidechains to final model
 
Please cite: PD2 ca2main: High quality protein backbone reconstruction from alpha carbons using Gaussian mixture models. Benjamin L. Moore, James W. Murray and James T. MacDonald, in preparation
Structural alphabet in PDB format
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Web Server issues: Lawrence Kelley

Algorithm: James MacDonald