Domain Assignment of 8catA

General Information

PDB Code: 8cat
Chain ID: A
Protein Name: Catalase 
Number of residues:  498
X-ray Resolution:    2.5 angstroms 
X-ray R factor:      .19
Percentage of Alpha: 38
Percentage of Beta:  18
Surface Area:        34340 angstroms
Ellipticity:         1.8
    

Domain Assignment

Author's Assignement

Number of Domains: 4
Domain 1
  Number of fragments: 1
    Start from Residue No: 3 (PDB file residue ID)
    Stop  at Residue No:   75 (PDB file residue ID)
  Percentage of Alpha:  34
  Percentage of Beta:   4
  Type of fold:         Alpha/Alpha
  Number of Residues:   73
  Surface Area:         7282
  Loss of surface Area: 923 angstroms
  Ellipticity:          2.5
Domain 2
  Number of fragments: 1
    Start from Residue No: 76 (PDB file residue ID)
    Stop  at Residue No:   320 (PDB file residue ID)
  Percentage of Alpha:  33
  Percentage of Beta:   31
  Type of fold:         Alpha+Beta
  Number of Residues:   245
  Surface Area:         12428
  Loss of surface Area: 3441 angstroms
  Ellipticity:          2.1
Domain 3
  Number of fragments: 1
    Start from Residue No: 321 (PDB file residue ID)
    Stop  at Residue No:   436 (PDB file residue ID)
  Percentage of Alpha:  26
  Percentage of Beta:   7
  Type of fold:         coil
  Number of Residues:   116
  Surface Area:         10266
  Loss of surface Area: 2369 angstroms
  Ellipticity:          2.3
Domain 4
  Number of fragments: 1
    Start from Residue No: 437 (PDB file residue ID)
    Stop  at Residue No:   500 (PDB file residue ID)
  Percentage of Alpha:  84
  Percentage of Beta:   0
  Type of fold:         Alpha/Alpha
  Number of Residues:   64
  Surface Area:         4364
  Loss of surface Area: 1185 angstroms
  Ellipticity:          2.4
    

Assignment from Islam's program

Domain 1
    Start from residue No: 3 (PDB file residue ID)
    Stop at residue No:    66 (PDB file residue ID)
Domain 2
  Number of fragment: 2
  Fragment 1
    Start from residue No: 67 (PDB file residue ID)
    Stop at residue No:    382 (PDB file residue ID)
  Fragment 2
    Start from residue No: 419 (PDB file residue ID)
    Stop at residue No:    500   (PDB file residue ID)
Domain 3
    Start from residue No: 383 (PDB file residue ID)
    Stop at residue No:    418 (PDB file residue ID)