Domain Assignment of 8abp


[List] [Search] [Assign] [Help] [Comments] [Top]

General Information


PDB Code: 8abp
Chain ID: NONE
Protein Name: L-Arabinose-Binding Protein 
Number of residues:  305
X-ray Resolution:    1.5 angstroms 
X-ray R factor:      .17
Percentage of Alpha: 55
Percentage of Beta:  26
Surface Area:        14354 angstroms
Ellipticity:         2.3
    

Domain Assignment


Author's Assignement

Number of Domains: 2
Domain 1
  Number of fragments: 2
  Fragment 1
    Start From residue No: 2 (PDB file residue ID)
    Stop at residue No:    109 (PDB file residue ID)
  Fragment 2
    Start From residue No: 255 (PDB file residue ID)
    Stop at residue No:    284 (PDB file residue ID)
  Percentage of Alpha:  50
  Percentage of Beta:   29
  Type of fold:         Alpha/Beta
  Number of Residues:   138
  Surface Area:         6607
  Loss of surface Area: 862 angstroms
  Ellipticity:          1.2
Domain 2
  Number of fragments: 2
  Fragment 1
    Start From residue No: 110 (PDB file residue ID)
    Stop at residue No:    254 (PDB file residue ID)
  Fragment 2
    Start From residue No: 285 (PDB file residue ID)
    Stop at residue No:    306 (PDB file residue ID)
  Percentage of Alpha:  59
  Percentage of Beta:   23
  Type of fold:         Alpha/Beta
  Number of Residues:   167
  Surface Area:         7747
  Loss of surface Area: 812 angstroms
  Ellipticity:          1.4
    

Assignment from Islam's program

Domain 1
  Number of fragment: 2
  Fragment 1
    Start from residue No: 2 (PDB file residue ID)
    Stop at residue No:    105 (PDB file residue ID)
  Fragment 2
    Start from residue No: 253 (PDB file residue ID)
    Stop at residue No:    286 (PDB file residue ID)
Domain 2
  Number of fragment: 2
  Fragment 1
    Start from residue No: 106 (PDB file residue ID)
    Stop at residue No:    252 (PDB file residue ID)
  Fragment 2
    Start from residue No: 287 (PDB file residue ID)
    Stop at residue No:    306 (PDB file residue ID)
    

[One domain] [Two domains] [Three domains] [Four domains] [Five domains]

Copyright © March 1996 domain@irsg17.lif.icnet.uk

BMM ICRF