Domain Assignment of 2pmgA


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General Information


PDB Code: 2pmg
Chain ID: A
Protein Name: Phosphoglucomutase 
Number of residues:  561
X-ray Resolution:    2.7 angstroms 
X-ray R factor:      .22
Percentage of Alpha: 38
Percentage of Beta:  27
Surface Area:        33600 angstroms
Ellipticity:         2.0
    

Domain Assignment


Author's Assignement

Number of Domains: 4
Domain 1
  Number of fragments: 1
    Start from Residue No: 1 (PDB file residue ID)
    Stop  at Residue No:   188 (PDB file residue ID)
  Percentage of Alpha:  37
  Percentage of Beta:   31
  Type of fold:         Alpha/Beta
  Number of Residues:   188
  Surface Area:         8734
  Loss of surface Area: 1282 angstroms
  Ellipticity:          1.3
Domain 2
  Number of fragments: 1
    Start from Residue No: 192 (PDB file residue ID)
    Stop  at Residue No:   315 (PDB file residue ID)
  Percentage of Alpha:  44
  Percentage of Beta:   16
  Type of fold:         Alpha/Beta
  Number of Residues:   124
  Surface Area:         7593
  Loss of surface Area: 3257 angstroms
  Ellipticity:          1.4
Domain 3
  Number of fragments: 1
    Start from Residue No: 325 (PDB file residue ID)
    Stop  at Residue No:   403 (PDB file residue ID)
  Percentage of Alpha:  49
  Percentage of Beta:   27
  Type of fold:         Alpha/Beta
  Number of Residues:   79
  Surface Area:         5273
  Loss of surface Area: 3508 angstroms
  Ellipticity:          1.3
Domain 4
  Number of fragments: 1
    Start from Residue No: 408 (PDB file residue ID)
    Stop  at Residue No:   561 (PDB file residue ID)
  Percentage of Alpha:  25
  Percentage of Beta:   32
  Type of fold:         Alpha+Beta
  Number of Residues:   154
  Surface Area:         9694
  Loss of surface Area: 1730 angstroms
  Ellipticity:          1.6
    

Assignment from Islam's program

Domain 1
    Start from residue No: 1 (PDB file residue ID)
    Stop at residue No:    420 (PDB file residue ID)
Domain 2
    Start from residue No: 421 (PDB file residue ID)
    Stop at residue No:    561 (PDB file residue ID)
    

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