Domain Assignment of 2mnr


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General Information


PDB Code: 2mnr
Chain ID: NONE
Protein Name: Mandelate Racemase 
Number of residues:  357
X-ray Resolution:    1.9 angstroms 
X-ray R factor:      .16
Percentage of Alpha: 50
Percentage of Beta:  24
Surface Area:        21485 angstroms
Ellipticity:         1.7
    

Domain Assignment


Author's Assignement

Number of Domains: 3
Domain 1
  Number of fragments: 1
    Start from Residue No: 3 (PDB file residue ID)
    Stop  at Residue No:   126 (PDB file residue ID)
  Percentage of Alpha:  52
  Percentage of Beta:   28
  Type of fold:         Alpha+Beta
  Number of Residues:   124
  Surface Area:         7316
  Loss of surface Area: 2244 angstroms
  Ellipticity:          2.1
Domain 2
  Number of fragments: 1
    Start from Residue No: 134 (PDB file residue ID)
    Stop  at Residue No:   319 (PDB file residue ID)
  Percentage of Alpha:  54
  Percentage of Beta:   24
  Type of fold:         Alpha/Beta
  Number of Residues:   186
  Surface Area:         8373
  Loss of surface Area: 2011 angstroms
  Ellipticity:          2.0
Domain 3
  Number of fragments: 1
    Start from Residue No: 331 (PDB file residue ID)
    Stop  at Residue No:   359 (PDB file residue ID)
  Percentage of Alpha:  28
  Percentage of Beta:   21
  Type of fold:         Alpha+Beta
  Number of Residues:   29
  Surface Area:         3338
  Loss of surface Area: 1758 angstroms
  Ellipticity:          4.0
    

Assignment from Islam's program

Domain 1
    Start from residue No: 3 (PDB file residue ID)
    Stop at residue No:    119 (PDB file residue ID)
Domain 2
    Start from residue No: 120 (PDB file residue ID)
    Stop at residue No:    359 (PDB file residue ID)
    

Assignment from Visual Inspection

Domain 1
    Start from residue No: 3 (PDB file residue ID)
    Stop at residue No:    119 (PDB file residue ID)
Domain 2
    Start from residue No: 120 (PDB file residue ID)
    Stop at residue No:    359 (PDB file residue ID)
    

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