Domain Assignment of 1ppn
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General Information
PDB Code: 1ppn
Chain ID: NONE
Protein Name: Papain
Number of residues: 212
X-ray Resolution: 1.6 angstroms
X-ray R factor: .16
Percentage of Alpha: 34
Percentage of Beta: 19
Surface Area: 12412 angstroms
Ellipticity: 1.7
Domain Assignment
Author's Assignement
Number of Domains: 2
Domain 1
Number of fragments: 2
Fragment 1
Start From residue No: 1 (PDB file residue ID)
Stop at residue No: 10 (PDB file residue ID)
Fragment 2
Start From residue No: 112 (PDB file residue ID)
Stop at residue No: 208 (PDB file residue ID)
Percentage of Alpha: 21
Percentage of Beta: 32
Type of fold: Alpha+Beta
Number of Residues: 107
Surface Area: 5758
Loss of surface Area: 1011 angstroms
Ellipticity: 1.5
Domain 2
Number of fragments: 2
Fragment 1
Start From residue No: 21 (PDB file residue ID)
Stop at residue No: 111 (PDB file residue ID)
Fragment 2
Start From residue No: 209 (PDB file residue ID)
Stop at residue No: 212 (PDB file residue ID)
Percentage of Alpha: 53
Percentage of Beta: 6
Type of fold: Alpha/Alpha
Number of Residues: 95
Surface Area: 5344
Loss of surface Area: 1043 angstroms
Ellipticity: 1.6
Assignment from Islam's program
Domain 1
Number of fragment: 2
Fragment 1
Start from residue No: 1 (PDB file residue ID)
Stop at residue No: 16 (PDB file residue ID)
Fragment 2
Start from residue No: 111 (PDB file residue ID)
Stop at residue No: 212 (PDB file residue ID)
Domain 2
Start from residue No: 17 (PDB file residue ID)
Stop at residue No: 110 (PDB file residue ID)
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Copyright © March 1996
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