Domain Assignment of 1pda
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General Information
PDB Code: 1pda
Chain ID: NONE
Protein Name: Porphobilinogen Deaminase
Number of residues: 296
X-ray Resolution: 1.8 angstroms
X-ray R factor: .19
Percentage of Alpha: 42
Percentage of Beta: 30
Surface Area: 17879 angstroms
Ellipticity: 1.8
Domain Assignment
Author's Assignement
Number of Domains: 3
Domain 1
Number of fragments: 2
Fragment 1
Start From residue No: 3 (PDB file residue ID)
Stop at residue No: 99 (PDB file residue ID)
Fragment 2
Start From residue No: 200 (PDB file residue ID)
Stop at residue No: 217 (PDB file residue ID)
Percentage of Alpha: 44
Percentage of Beta: 35
Type of fold: Alpha/Beta
Number of Residues: 106
Surface Area: 5942
Loss of surface Area: 1144 angstroms
Ellipticity: 1.7
Domain 2
Number of fragments: 1
Start from Residue No: 105 (PDB file residue ID)
Stop at Residue No: 193 (PDB file residue ID)
Percentage of Alpha: 38
Percentage of Beta: 27
Type of fold: Alpha/Beta
Number of Residues: 89
Surface Area: 5065
Loss of surface Area: 1314 angstroms
Ellipticity: 1.5
Domain 3
Number of fragments: 1
Start from Residue No: 222 (PDB file residue ID)
Stop at Residue No: 307 (PDB file residue ID)
Percentage of Alpha: 49
Percentage of Beta: 33
Type of fold: Alpha+Beta
Number of Residues: 86
Surface Area: 5049
Loss of surface Area: 1223 angstroms
Ellipticity: 2.2
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