Domain Assignment of 1gpb


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General Information


PDB Code: 1gpb
Chain ID: NONE
Protein Name: Glycogen Phosphorylase B 
Number of residues:  823
X-ray Resolution:    1.9 angstroms 
X-ray R factor:      .19
Percentage of Alpha: 58
Percentage of Beta:  18
Surface Area:        39332 angstroms
Ellipticity:         1.6
    

Domain Assignment


Author's Assignement

Number of Domains: 2
Domain 1
  Number of fragments: 1
    Start from Residue No: 19 (PDB file residue ID)
    Stop  at Residue No:   489 (PDB file residue ID)
  Percentage of Alpha:  53
  Percentage of Beta:   24
  Type of fold:         Alpha/Beta
  Number of Residues:   471
  Surface Area:         22121
  Loss of surface Area: 3399 angstroms
  Ellipticity:          1.7
Domain 2
  Number of fragments: 1
    Start from Residue No: 490 (PDB file residue ID)
    Stop  at Residue No:   841 (PDB file residue ID)
  Percentage of Alpha:  64
  Percentage of Beta:   10
  Type of fold:         Alpha/Beta
  Number of Residues:   352
  Surface Area:         17211
  Loss of surface Area: 3450 angstroms
  Ellipticity:          1.8
    

Assignment from Islam's program

Domain 1
  Number of fragment: 2
  Fragment 1
    Start from residue No: 19 (PDB file residue ID)
    Stop at residue No:    481 (PDB file residue ID)
  Fragment 2
    Start from residue No: 817 (PDB file residue ID)
    Stop at residue No:    841 (PDB file residue ID)
Domain 2
    Start from residue No: 482 (PDB file residue ID)
    Stop at residue No:    816 (PDB file residue ID)
    

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