3D-PSSM Text Results Page
This data has been generated by the 3D-PSSM web server
Biomolecular Modelling Laboratory
Imperial Cancer Research Fund
http://www.sbg.bio.ic.ac.uk/
Please See the following URL for an HTML interface to the results
Of this fold recognition experiment:
http://www.sbg.bio.ic.ac.uk/servers/3dpssm/output/THISISANEXAMPLEANDDOESNOTEXIST.job_summary.html
At this URL you will be able to view models built for each of the top 20
hits, colour-coded alignments indicating regions of good and bad alignment,
and hyperlinks for each hit to the scop database.
NEW: You may now download a tarred, gzipped html version of your results here:
http://www.sbg.bio.ic.ac.uk/servers/3dpssm/output/THISISANEXAMPLEANDDOESNOTEXIST.job.tar.gz
Please Cite:
(1) CAFASP-1: Critical Assessment of Fully Automated Structure Prediction Methods
Fischer, D., Barret, C., Bryson, K., Elofsson, A., Godzik, A., Jones, D., Karplus, K.J., Kelley, L.A., Maccallum, R.M., Pawowski, K., Rost, B., Rychlewski, L. and Sternberg, M.J.
Proteins: Structure, Function and Genetics, Suppl 3:209-217 (1999)
(2) Recognition of Remote Protein Homologies Using Three-Dimensional Information
to Generate a Position Specific Scoring Matrix in the program 3D-PSSM
L.A. Kelley, R. Maccallum and M.J.E. Sternberg
RECOMB 99, Proceedings of the Third Annual Conference on Computational Molecular Biology
Pages 218-225
Editors: Sorin Istrail, Pavel Pevzner, Michael Waterman
Publisher: The Association for Computing Machinery, New York, New York 10036
April 1999
This service is available AS IS and at your own risk. The Imperial Cancer Research Fund
does not give any representation or warranty nor assume any liability or responsibility
for the service or the results posted (whether as to their accuracy, completeness, quality or otherwise).
******************************************************************************
Secondary Structure Prediction by Psi-Pred
(http://globin.bio.warwick.ac.uk/psipred/)
Conf: 922443513556667788776522468999988630356631010311356203408878
Pred: CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCEEEEE
AA: MTRINLTLVSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTFF
10 20 30 40 50 60
Conf: 415889999889999999862775547766887731355432678744448889998877
Pred: EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
AA: YDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDE
70 80 90 100 110 120
Conf: 751688511100323469
Pred: HHCCCCCCEEECCCCCCC
AA: KIAQRPTWYKYYGKAIYA
130
Fold Recognition by the 3D-PSSM server
(http://www.bmm/icnet.uk/servers/3dpssm/)
=========================================
Summary Fold Recognition Results (For Alignments see Below)
================================
Results are sorted by E-value, most confident assignment first.
E-values below 0.05 are highly confident. E-values up to 1.0 are worthy of attention.
Often the top ranking hit is correct even at high E-values.
Domain E-value Sawted Score Class Fold Superfamily Family
====== ======= ============ ===== ==== =========== ======
: 2end-0 2.70e-03 0.00 All alpha T4 endonuclease V T4 endonuclease V T4 endonuclease V
: 1babB0 5.70e+00 0.97 All alpha Globin-like Globin-like Globins
: 1setA1 5.73e+00 0.91 All alpha Long alpha-hairpin Seryl-tRNA synthetase (SerRS) Seryl-tRNA synthetase (SerRS)
: 1mdyB0 7.91e+00 0.85 All alpha Helix-loop-helix DNA-binding Helix-loop-helix DNA-binding Helix-loop-helix DNA-binding
: 2rslC0 8.12e+00 0.76 Alpha and beta (a/b gamma,delta resolvase, large gamma,delta resolvase, large gamma,delta resolvase, large
: 1eca-0 8.90e+00 0.70 All alpha Globin-like Globin-like Globins
: 1irl-0 9.71e+00 0.97 All alpha 4-helical cytokines 4-helical cytokines Short-chain cytokines
: 1bhdA0 1.00e+01 1.00 Unknown 356 Unknown 356 Unknown 356 Unknown 356
: 1leb-0 1.09e+01 0.58 All alpha DNA-binding 3-helical bundle Winged DNA-binding domain LexA repressor, N-terminal DN
: 1srsB0 1.16e+01 0.54 Alpha and beta (a+b Serum response factor (SRF) c Serum response factor (SRF) c Serum response factor (SRF) c
: 1ruoA1 1.17e+01 0.62 All alpha DNA-binding 3-helical bundle Winged DNA-binding domain Catabolite gene activator pro
: 1osa-0 1.18e+01 0.83 All alpha EF Hand-like EF-hand Calmodulin-like
: 1ihfB0 1.24e+01 0.49 All alpha Prokaryotic DNA-bending prote Prokaryotic DNA-bending prote Prokaryotic DNA-bending prote
: 1efuB1 1.25e+01 0.92 Alpha and beta (a+b Elongation factor Ts (EF-Ts), Elongation factor Ts (EF-Ts), Elongation factor Ts (EF-Ts),
: 1tbrR- 1.28e+01 1.00 Small proteins ^ Sm Ovomucoid/PCI-1 like inhibito Ovomucoid/PCI-1 like inhibito animal Kazal-type inhibitors
: 1aisB2 1.31e+01 1.00 All alpha Cyclin-like Cyclin-like Transcription factor IIB (TFI
: 1l58-0 1.31e+01 0.52 Alpha and beta (a+b Lysozyme-like Lysozyme-like Phage T4 lysozyme
: 1t1dA0 1.32e+01 0.94 Unknown 245 Unknown 245 Unknown 245 Unknown 245
: 1tadC1 1.32e+01 0.94 All alpha Transducin (alpha subunit), i Transducin (alpha subunit), i Transducin (alpha subunit), i
: 2psr-0 1.37e+01 1.00 Unknown 28 Unknown 28 Unknown 28 Unknown 28
Top 20 Alignments (Not in Order)
=================
MSF: 169 Type: P Check: 100 ..
Name: T4endo_PSS Len: 169 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 169 Check: 100 Weight: 1.00
Name: 1babB0_Seq Len: 169 Check: 100 Weight: 1.00
Name: 1babB0_SS Len: 169 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEE... ..EHHHH... ..HHHH.... ...HHHHHHH HHHHH.....
T4endo_Seq MTRINLT... ..LVSEL... ..ADQH.... ...LMAEYRE LPRVF.....
------------ ++LT +V-+L +D++ L-++Y-+ +-R+F
1babB0_Seq ...VHLTPEE KSAVTALWGK VNVDEVGGEA LGRLLVVYPW TQRFFESFGD
1babB0_SS ...CCCCHHH HHHHHHHHHC CCHHHHHHHH HHHHHHHCHH HHCCCCCCCC
CORE ...4040000 0005003200 3030072209 4402620000 2100300100
50 100
T4endo_PSS .......... HHHHHHHCCC CCCCEEECCC EEEEEC.CEE EEEEHHHHHH
T4endo_Seq .......... GAVRKHVANG KRVRDFKISP TFILGA.GHV TFFYDKLEFL
------------ ++V++H G K+V-+ +- +-+L++ +++ ---+-+L--L
1babB0_Seq LSTPDAVMGN PKVKAH...G KKVLG...AF SDGLAHLDNL KGTFATLSEL
1babB0_SS CCCHHHHHHC HHHHHH...H HHHHH...HH HHHHCCCCCH HHHHHHHHHH
CORE 6000007100 008000...2 00181...14 1013005003 0001000000
100 150
T4endo_PSS H.......HH HHHHHHHHHH CCCCCCCCCC CCCCCHHHHH HCCCCCCHHH
T4endo_Seq R.......KR QIELIAECLK RGFNIKDTTV QDISDIPQEF RGDYIPHEAS
------------ - +- +-+L++++L ++-+--+F -+++-P +++
1babB0_Seq HCDKLHVDPE NFRLLGNVL. .......... ..VCVLAHHF GKEFTP.PVQ
1babB0_SS HHHHCCCCHH HHHHHHHHH. .......... ..HHHHHHHH HHHCCH.HHH
CORE 0000000000 010140038. .......... ..20451001 000200.010
151 169
T4endo_PSS HHHHH..HHH HHHHCCCCC
T4endo_Seq IAISQ..ARL DEKIAQRPT
------------ -A+-+ A-+ ---+A++--
1babB0_Seq AAYQKVVAGV ANALAHKYH
1babB0_SS HHHHHHHHHH HHHHHCCCC
CORE 0310074012 002100000
MSF: 142 Type: P Check: 100 ..
Name: T4endo_PSS Len: 142 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 142 Check: 100 Weight: 1.00
Name: 1eca-0_Seq Len: 142 Check: 100 Weight: 1.00
Name: 1eca-0_SS Len: 142 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHH....H HHHHHHHHHH HHHHHHHHHC CCCCCCEE..
T4endo_Seq MTRINLTLVS ELADQ....H LMAEYRELPR VFGAVRKHVA NGKRVRDF..
------------ ++--+-++V- +++D+ - +-+-Y+-+-- ---+-+K - ++++--D-
1eca-0_Seq LSADQISTVQ ASFDKVKGDP VGILYAVFKA DPSIMAK..F TQFAGKDLES
1eca-0_SS CCHHHHHHHH HHHHHCCCCH HHHHHHHHHH CHHHHHH..C CCCCCCCHHH
CORE 8000050191 0280040002 4075114601 0005500..2 0050000600
50 100
T4endo_PSS .ECCCEEEEE CCEEEEEEHH ..HHH..HHH HHHHHHHHHH HCCCC...CC
T4endo_Seq .KISPTFILG AGHVTFFYDK ..LEF..LRK RQIELIAECL KRGFN...IK
------------ K-++-F+-- A+++--F++K +E- ++- +-+++-A+-- +RG-- -+
1eca-0_Seq IKGTAPFETH ANRIVGFFSK IIGELPNIEA DVNTFVASHK PRGVTHDQLN
1eca-0_SS HHCCHHHHHH HHHHHHHHHH HHHHCCCHHH HHHHHHHHHH HHCCCHHHHH
CORE 5000017000 5003501620 2800820300 0400430000 0004000070
101 142
T4endo_PSS CCCCCCCCCH HHHHHCCCCC CHHHHHHHHH HHHHHHCCCC CC
T4endo_Seq DTTVQDISDI PQEFRGDYIP HEASIAISQA RLDEKIAQRP YA
------------ +-----+S-+ +-+-D+-- +EA+++---+ -+---I+++-
1eca-0_Seq NFRAGFVSYM ..KAHTDFAG AEAAWGATLD TFFGMIFSKM ..
1eca-0_SS HHHHHHHHHH ..HHHCCCCC HHHHHHHHHH HHHHHHHHCC ..
CORE 0400162013 ..00010200 2005403740 2320261005 ..
MSF: 173 Type: P Check: 100 ..
Name: T4endo_PSS Len: 173 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 173 Check: 100 Weight: 1.00
Name: 1setA1_Seq Len: 173 Check: 100 Weight: 1.00
Name: 1setA1_SS Len: 173 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ M++ -++L-+---+ -++-+-+--- --D-
1setA1_Seq .......... .......MVD LKRLRQEPEV FHRAIREKGV ALDL......
1setA1_SS .......... .......CCC HHHHHHHHHH HHHHHHHHCC CCCH......
CORE .......... .......160 1009000100 5001300001 0604......
50 100
T4endo_PSS EEECCEEEEE EHH.HHHHHH HHHHHHHH.. .HHHCCCCC. ...CCCCCCC
T4endo_Seq ILGAGHVTFF YDK.LEFLRK RQIELIAE.. .CLKRGFNI. ...KDTTVQD
------------ ----- -D+ ++-L+K R--E+-+E --KR--+- K++-+--
1setA1_Seq .....EALLA LDREVQELKK RLQEVQTERN QVAKRVPKAP PEEKEALIAR
1setA1_SS .....HHHHH HHHHHHHHHH HHHHHHHHHH HHHHHHHHCC HHHHHHHHHH
CORE .....00920 1000100100 0100100000 0000000000 0000000000
100 150
T4endo_PSS CCCHHHHHHC CCCCCHHHHH HHHHHHHHHH CCCC..CCEE ECCCCHHHHH
T4endo_Seq ISDIPQEFRG DYIPHEASIA ISQARLDEKI AQRP..TWYK YYGKAIAISQ
------------ ---+-+E-+- -E--+- --+ARL+--+ -Q-P -W -G--
1setA1_Seq GKALGEEAKR ....LEEALR EKEARLEALL LQVPLPPW.. .PGAP.....
1setA1_SS HHHHHHHHHH ....HHHHHH HHHHHHHHHH HCCCCCCC.. .CCCC.....
CORE 0000000100 ....100010 0000030044 00921100.. .0000.....
151 173
T4endo_PSS HHHHHHHCCC CCCEEECCCC CCC
T4endo_Seq ARLDEKIAQR PTWYKYYGKA IYA
------------
1setA1_Seq .......... .......... ...
1setA1_SS .......... .......... ...
CORE .......... .......... ...
MSF: 204 Type: P Check: 100 ..
Name: T4endo_PSS Len: 204 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 204 Check: 100 Weight: 1.00
Name: 1leb-0_Seq Len: 204 Check: 100 Weight: 1.00
Name: 1leb-0_SS Len: 204 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------
1leb-0_Seq .......... .......... .......... .......... ..........
1leb-0_SS .......... .......... .......... .......... ..........
CORE .......... .......... .......... .......... ..........
50 100
T4endo_PSS EEECCEEEEE EHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCHHHHH
T4endo_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISDIPQEF
------------ ++-L-+R Q+E +-+-++ ++-+ +T+- ---++---++
1leb-0_Seq .......... ...MKALTAR QQE.VFDLIR DHIS..QTGM PPTRAEIAQR
1leb-0_SS .......... ...CCCCCHH HHH.HHHHHH HHHH..HCCC CCCHHHHHHH
CORE .......... ...0003000 000.640290 0000..0000 2400006200
100 150
T4endo_PSS HCCCCCC... HHHHHHHHHH HHHHHCCCCC CEEECCCCHH HHHHHHCCCC
T4endo_Seq RGDYIPH... EASIAISQAR LDEKIAQRPT WYKYYGKAEL IAECLKRGFN
------------ -G+--P+ E++-A+-++- +-E+++-++- -+++-+--
1leb-0_Seq LGFRSPNAAE EHLKALARKG VIEIVSGASR GIRLLQEE.. ..........
1leb-0_SS HCCCCHHHHH HHHHHHHHHC CEEECCCCCC CEEECCCC.. ..........
CORE 2030000140 0080064000 3904000000 18050000.. ..........
150 200
T4endo_PSS CCCCCCCCCC CHHHHHHCCC CCCHHHHHHH HHHHHHHHCC CCCCEEECCC
T4endo_Seq IKDTTVQDIS DIPQEFRGDY IPHEASIAIS QARLDEKIAQ RPTWYKYYGK
------------
1leb-0_Seq .......... .......... .......... .......... ..........
1leb-0_SS .......... .......... .......... .......... ..........
CORE .......... .......... .......... .......... ..........
201
T4endo_PSS CCCC
T4endo_Seq AIYA
------------
1leb-0_Seq ....
1leb-0_SS ....
CORE ....
MSF: 208 Type: P Check: 100 ..
Name: T4endo_PSS Len: 208 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 208 Check: 100 Weight: 1.00
Name: 1ruoA1_Seq Len: 208 Check: 100 Weight: 1.00
Name: 1ruoA1_SS Len: 208 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------
1ruoA1_Seq .......... .......... .......... .......... ..........
1ruoA1_SS .......... .......... .......... .......... ..........
CORE .......... .......... .......... .......... ..........
50 100
T4endo_PSS EEECCEEEEE EHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCHHHHH
T4endo_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISDIPQEF
------------ -+-++- ---L++++-+ ++-+--+-++ Q I+---QE-
1ruoA1_Seq .......... ....DVTGRI AQTLLNLAKQ PDAMTHPDGM Q.IKITRQEI
1ruoA1_SS .......... ....CHHHHH HHHHHHHHCC CCCEECCCCE E.EECCHHHH
CORE .......... ....030007 0028006900 0070000003 0.90400008
100 150
T4endo_PSS HCCCCCCHHH HHHHHHHHHH HHCCCCCCEE ECCC..CCCH HHHHHHHHHH
T4endo_Seq RGDYIPHEAS IAISQARLDE KIAQRPTWYK YYGK..AIYR QIELIAECLK
------------ G+++ ++ -+-+--R+-- ++-+-- -++ +-GK -+Y
1ruoA1_Seq .GQIV...GC SRFTVGRILK MLEDQN.LIS AHGKTIVVY. ..........
1ruoA1_SS .HHHH...CC CHHHHHHHHH HHHHHC.CCE CCCEEEECC. ..........
CORE .2033...04 0000600350 010000.020 000040700. ..........
150 200
T4endo_PSS CCCCCCCCCC CCCCCHHHHH HCCCCCCHHH HHHHHHHHHH HHCCCCCCEE
T4endo_Seq RGFNIKDTTV QDISDIPQEF RGDYIPHEAS IAISQARLDE KIAQRPTWYK
------------
1ruoA1_Seq .......... .......... .......... .......... ..........
1ruoA1_SS .......... .......... .......... .......... ..........
CORE .......... .......... .......... .......... ..........
201
T4endo_PSS ECCCCCCC
T4endo_Seq YYGKAIYA
------------
1ruoA1_Seq ........
1ruoA1_SS ........
CORE ........
MSF: 139 Type: P Check: 100 ..
Name: T4endo_PSS Len: 139 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 139 Check: 100 Weight: 1.00
Name: 2end-0_Seq Len: 139 Check: 100 Weight: 1.00
Name: 2end-0_SS Len: 139 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ TRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
2end-0_Seq .TRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
2end-0_SS .CCCCCCCHH HCCHHHHHHH HHHHHHHHHH HHHHHHHCCC HHHCCCCCCC
CORE .208072020 0300004101 1005009300 4000200000 1001010005
50 100
T4endo_PSS EEECCEEEEE EHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCCHHHHH
T4endo_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISDIPQEF
------------ ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISDIPQEF
2end-0_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISDIPQEF
2end-0_SS CCCCCCHHHH CCEHHHHHHH HHHHHHHHHH HCCCCCCCCC CCCCCCCHHH
CORE 0000003017 1006058000 0004100200 0010200000 0020040003
101 139
T4endo_PSS HCCCCCCHHH HHHHHHHHHH HHCCCCCCEE ECCCCCCCC
T4endo_Seq RGDYIPHEAS IAISQARLDE KIAQRPTWYK YYGKAIYAA
------------ RGDYIPHEAS IAISQARLDE KIAQRPTWYK YYGKAIYA
2end-0_Seq RGDYIPHEAS IAISQARLDE KIAQRPTWYK YYGKAIYA.
2end-0_SS ECCCCCCHHH HHHHHHHHHH HHHHCHHHCC ECCECCCC.
CORE 0102020003 2013000100 0000000000 00000000.
MSF: 143 Type: P Check: 100 ..
Name: T4endo_PSS Len: 143 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 143 Check: 100 Weight: 1.00
Name: 1irl-0_Seq Len: 143 Check: 100 Weight: 1.00
Name: 1irl-0_SS Len: 143 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ ----+-T--+ -L--+HL+ --L-++-+- +-+- -N-K- -R-+ ----+
1irl-0_Seq APTSSSTKKT QLQLEHLL.. .LDLQMILNG INNY.KNPKL TRML.TAKFY
1irl-0_SS CCCCCCCHHH HHHHHHHH.. .HHHHHHHHH HHCC.CCCCC CCCH.HHCEC
CORE 0000000000 00000020.. .003003400 8001.00000 0050.16060
50 100
T4endo_PSS EEECCEEEEE EHHHHHHHHH HHHHHHHHHH CCCCCCCCCC .CCCCCHHHH
T4endo_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV .QDISDIPQE
------------ +---+----+ --+LE-+-K- --E+--+--- ++F+-+-+-- ++I--I-+E
1irl-0_Seq MPKKATELKH LQCLEEELKP LEEVLNLAQS KNFHLRPRDL ISNINVIVLE
1irl-0_SS CECCCCCCCH HHHHHHHHHH HHHHHHHHCC CCCCCCCHHH HHHHHHHHHH
CORE 0000000100 2003000101 7007301700 0040100001 5002000200
101 143
T4endo_PSS HHC....... ...CCCCCHH HHHHHHHHHH HHHCCCCCCC CCC
T4endo_Seq FRG....... ...DYIPHEA SIAISQARLD EKIAQRPTKA IYA
------------ --G D-----+ +---+--+-- -+I--+-T
1irl-0_Seq LKGSETTFMC EYADETATIV EFLNRWITFC QSIISTLT.. ...
1irl-0_SS HCCCCCCCCC CECCCCCEHH HHHHHHHHHH HHHHHHHC.. ...
CORE 0000000000 0000002190 0530012012 00000000.. ...
MSF: 163 Type: P Check: 100 ..
Name: T4endo_PSS Len: 163 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 163 Check: 100 Weight: 1.00
Name: 1mdyB0_Seq Len: 163 Check: 100 Weight: 1.00
Name: 1mdyB0_SS Len: 163 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHH...H HHHHHHHHHH HHHHHHHHCC CCCCCEEECC
T4endo_Seq MTRINLTLVS ELADQH...L MAEYRELPRV FGAVRKHVAN GKRVRDFKIS
------------ + -+AD+- - M+E-R+L-+V -+A--+--+- -+++-+ +--
1mdyB0_Seq .........T TNADRRKAAT MRERRRLSKV NEAFETLKRS TSSNPN.QRL
1mdyB0_SS .........C HHHHHHHHHH HHHHHHHHHH HHHHHHHHHH CCCCCC.CCC
CORE .........0 0000000000 0000000000 0004008100 520000.005
50 100
T4endo_PSS CEEEEECCEE EEEEHHHHHH HH..HHHHHH HHHHHCCHHH HHHHHHHHHH
T4endo_Seq PTFILGAGHV TFFYDKLEFL RK..RQIELI AECLKRGKLE FLRKRQIELI
------------ P K+E-L R+ R-IE - -+-L+R-
1mdyB0_Seq P......... .....KVEIL RNAIRYIE.G LQALLRD... ..........
1mdyB0_SS C......... .....HHHHH HHHHHHHH.H HHHHCCC... ..........
CORE 0......... .....00095 01800000.0 0000000... ..........
100 150
T4endo_PSS HHHHHCCCCC CCCCCCCCCC HHHHHHCCCC CCHHHHHHHH HHHHHHHCCC
T4endo_Seq AECLKRGFNI KDTTVQDISD IPQEFRGDYI PHEASIAISQ ARLDEKIAQR
------------
1mdyB0_Seq .......... .......... .......... .......... ..........
1mdyB0_SS .......... .......... .......... .......... ..........
CORE .......... .......... .......... .......... ..........
151 163
T4endo_PSS CCCEEECCCC CCC
T4endo_Seq PTWYKYYGKA IYA
------------
1mdyB0_Seq .......... ...
1mdyB0_SS .......... ...
CORE .......... ...
MSF: 161 Type: P Check: 100 ..
Name: T4endo_PSS Len: 161 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 161 Check: 100 Weight: 1.00
Name: 1osa-0_Seq Len: 161 Check: 100 Weight: 1.00
Name: 1osa-0_SS Len: 161 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHH.. .......... ..HHHHHHHC
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVF.. .......... ..GAVRKHVA
------------ + E--+++-+AE ++E+-++F -++R+---
1osa-0_Seq .........A EQLTEEQIAE FKEAFALFDK DGDGTITTKE LGTVMRSLGQ
1osa-0_SS .........C CCCCHHHHHH HHHHHHHHCC CCCCCECHHH HHHHHHHHCC
CORE .........0 0010000100 2002500500 0001090200 7101200000
50 100
T4endo_PSS CCCCCCEEEC CCEE.EEECC EEEEEEHHHH HH.....HHH HHHHHHHHHH
T4endo_Seq NGKRVRDFKI SPTF.ILGAG HVTFFYDKLE FL.....RKR QIELIAECLK
------------ N-+--+--++ -+++ +-G-G ++-F -E FL +++ +-+-+-E-++
1osa-0_Seq NPTEAELQDM INEVDADGNG TIDF....PE FLSLMARKMK EQDSEEELIE
1osa-0_SS CCCHHHHHHH HHHCCCCCCC CECH....HH HHHHHHHHHH HHHHHHHHHH
CORE 0100004002 7002000001 0701....00 6100100000 0000000200
100 150
T4endo_PSS ..CCCCCCCC CCCCCCCHHH HHH..CCCCC CHH.HHHHHH H.........
T4endo_Seq ..RGFNIKDT TVQDISDIPQ EFR..GDYIP HEA.SIAISQ A.........
------------ +-F---++ -+-+++++-+ --+ G+++- +++ --+I++ A
1osa-0_Seq AFKVFDRDGN GLISAAELRH VMTNLGEKLT DDEVDEMIRE ADIDGDGHIN
1osa-0_SS HHHHHCCCCC CCECHHHHHH HHHHHCCCCC HHHHHHHHHH HCCCCCCCEC
CORE 2200500000 0070300800 1200100020 0004002500 3000001070
151 161
T4endo_PSS ..HHHHHHCC C
T4endo_Seq ..RLDEKIAQ R
------------ -+-+-+-- +
1osa-0_Seq YEEFVRMMVS K
1osa-0_SS HHHHHHHHHC C
CORE 0005000000 0
MSF: 147 Type: P Check: 100 ..
Name: T4endo_PSS Len: 147 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 147 Check: 100 Weight: 1.00
Name: 1ihfB0_Seq Len: 147 Check: 100 Weight: 1.00
Name: 1ihfB0_SS Len: 147 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHH..HH HHHHHHHHHH HHHHHHHCCC CC........
T4endo_Seq MTRINLTLVS ELADQH..LM AEYRELPRVF GAVRKHVANG KR........
------------ MT+--L+-+- --+--H +- --++-+--++ -++++-+A+G +R
1ihfB0_Seq MTKSELIERL ATQQSHIPAK TVEDAVKEML EHMASTLAQG ERIEIRGFGS
1ihfB0_SS CEHHHHHHHH HHHCCCCCHH HHHHHHHHHH HHHHHHHHHC CCEEECCCEE
CORE 1000036006 7000003040 0900070000 0040029001 0080002220
50 100
T4endo_PSS .......CCE EE..CCCEEE EECCEEEEEE HHHHHHHHHH HHHHHHHHHC
T4endo_Seq .......VRD FK..ISPTFI LGAGHVTFFY DKLEFLRKRQ IELIAECLKR
------------ -R- -+ -+---+ --+G++-+++ ---+-LR+R --
1ihfB0_Seq FSLHYRAPRT GRNPKTGDKV ELEGKYVPHF KPGKELRDR. ........AN
1ihfB0_SS EEEEEECCEE EECCCCCCEE EECCEEEEEE EECHHHHHH. ........HC
CORE 7050000000 0000000000 0000000304 001004000. ........00
101 147
T4endo_PSS CCCCHHHHHH CCCCCCHHHH HHHHHHHHHH HCCCCCCEEE CCCCCCC
T4endo_Seq GFNDIPQEFR GDYIPHEASI AISQARLDEK IAQRPTWYKY YGKAIYA
------------ +++
1ihfB0_Seq IYG....... .......... .......... .......... .......
1ihfB0_SS CCC....... .......... .......... .......... .......
CORE 000....... .......... .......... .......... .......
MSF: 173 Type: P Check: 100 ..
Name: T4endo_PSS Len: 173 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 173 Check: 100 Weight: 1.00
Name: 1tadC1_Seq Len: 173 Check: 100 Weight: 1.00
Name: 1tadC1_SS Len: 173 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHH..HHHH HHHHHHHCCC CCCCEEECCC
T4endo_Seq MTRINLTLVS ELADQHLMAE YREL..PRVF GAVRKHVANG KRVRDFKISP
------------ -++----E ++++ --++ -+++--V +--+-++I-+
1tadC1_Seq .......... ..YSLEECLE FIAIIYGNTL QSILAIV... RAMTTLNIQY
1tadC1_SS .......... ..CCHHHHHH HHHHHHHHHH HHHHHHH... HHHHHHCCCC
CORE .......... ..00000000 0000100026 0283157... 0120000102
50 100
T4endo_PSS EEEEECCEEE EEEHHHHHHH HHHHHHHH.. .......... ..........
T4endo_Seq TFILGAGHVT FFYDKLEFLR KRQIELIA.. .......... ..........
------------ + ++--++-+ +--+++-+
1tadC1_Seq G......... ..DSARQDDA RKLMHMADTI EEGTMPKEMS DIIQRLWKDS
1tadC1_SS C......... ..CHHHHHHH HHHHHHHHCC CCCCCCHHHH HHHHHHHHCH
CORE 0......... ..00000005 0091014002 0000400042 0270081000
100 150
T4endo_PSS ...HHHHCC. .CCCCCCCCC CCCCHHHHHH CCCCCCHHHH HHHHHHHHHH
T4endo_Seq ...ECLKRG. .FNIKDTTVQ DISDIPQEFR GDYIPHEASI AISQARLDEK
------------ +C-+R+ +++-D+++- -+SD+----+ -+Y+P-E--+ L
1tadC1_Seq GIQACFDRAS EYQLNDSAGY YLSDLERLVT PGYVPTEQDV ......L...
1tadC1_SS HHHHHHHHHH HCCCCCHHHH HHHHHHHHHC CCCCCCHHHH ......H...
CORE 0700220000 0102000100 0500300110 0000000000 ......0...
151 173
T4endo_PSS HCCCCCHCCC CCCEEECCCC CCC
T4endo_Seq IAQRPTIAQR PTWYKYYGKA IYA
------------ -++++T
1tadC1_Seq RSRVKT.... .......... ...
1tadC1_SS HCCCCC.... .......... ...
CORE 000000.... .......... ...
MSF: 187 Type: P Check: 100 ..
Name: T4endo_PSS Len: 187 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 187 Check: 100 Weight: 1.00
Name: 1aisB2_Seq Len: 187 Check: 100 Weight: 1.00
Name: 1aisB2_SS Len: 187 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ +-PT-
1aisB2_Seq .......... .......... .......... .......... .....VKPTD
1aisB2_SS .......... .......... .......... .......... .....CCHHH
CORE .......... .......... .......... .......... .....00110
50 100
T4endo_PSS EEECCEEEEE EHHH..HHHH HHHHHHHHHH HHCCCCCCCC CCC.......
T4endo_Seq ILGAGHVTFF YDKL..EFLR KRQIELIAEC LKRGFNIKDT TVQ.......
------------ -+-+ F+ ++-- E-+R -R-IE++-E+ +KRG+-++-+ --+
1aisB2_Seq YVNK....FA DELGLSEKVR RRAIEILDEA YKRGLTSGKS PAGLVAAALY
1aisB2_SS HHHH....HH HHHCCCHHHH HHHHHHHHHH HHHCCCCCCC HHHHHHHHHH
CORE 0500....21 0020000020 0081095005 0000410000 0203344950
100 150
T4endo_PSS ......CCCC HHHHHHCCCC CCHHHHHHHH HHHHHHHCCC .CCCHHHHHH
T4endo_Seq ......DISD IPQEFRGDYI PHEASIAISQ ARLDEKIAQR .PTWIPQEFR
------------ +++- -++E+----- --E+++--+- --L-EK---+ P+-
1aisB2_Seq IASLLEGEKR TQREVAEVAR VTEVTVRNRY KELVEKLKIK VPIA......
1aisB2_SS HHHHHHCCCC CHHHHHHHHC CCHHHHHHHH HHHHHHHCCC CCCC......
CORE 5600300000 0000320130 3000040000 0093003060 1000......
151 187
T4endo_PSS CCCCCCHHHH HHHHHHHHHH HCCCCCCEEE CCCCCCC
T4endo_Seq GDYIPHEASI AISQARLDEK IAQRPTWYKY YGKAIYA
------------
1aisB2_Seq .......... .......... .......... .......
1aisB2_SS .......... .......... .......... .......
CORE .......... .......... .......... .......
MSF: 162 Type: P Check: 100 ..
Name: T4endo_PSS Len: 162 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 162 Check: 100 Weight: 1.00
Name: 2rslC0_Seq Len: 162 Check: 100 Weight: 1.00
Name: 2rslC0_SS Len: 162 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEE..ECCC
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDF..KISP
------------ M--+----VS - ++Q+L-++ -R +---A+-K+ -R-F K+S-
2rslC0_Seq MRLFGYARVS T.SQQSLDIQ VR........ .ALKDAGVKA NRIFTDKASG
2rslC0_SS CCEEEEEEEC C.CHHHHHHH HH........ .HHHHCCCCC CCEEEEECCC
CORE 0034822000 0.00000000 10........ .070030700 0053000000
50 100
T4endo_PSS EEE....... ....EECCEE EEEEHHHHHH ...HHHHHHH HHHHHHCCCC
T4endo_Seq TFI....... ....LGAGHV TFFYDKLEFL ...RKRQIEL IAECLKRGFN
------------ +-- +-+G+V +---KL+-L -+-+I+L I+E--++G-+
2rslC0_Seq SSSDRKGLDL LRMKVEEGDV .ILVKKLDRL GRDTADMIQL IKEFDAQGVS
2rslC0_SS CCCCCHHHHH HHHHCCCCCE .EEECCHHHC CCCHHHHHHH HHHHHHHCCE
CORE 0000001200 7000500101 .975003007 0000002102 7005000051
100 150
T4endo_PSS CCCCCCCCCC CHHHHHHCCC CCCHHHHHHH HHHHHHHHCC CCCHHHCCCC
T4endo_Seq IKDTTVQDIS DIPQEFRGDY IPHEASIAIS QARLDEKIAQ RPTEKIAQRP
------------ I+ F--D+ I--++-++-- -+++-+-+AQ ---
2rslC0_Seq IR........ .....FIDDG ISTDGEMGKM VVTILSAVAQ AER.......
2rslC0_SS EE........ .....ECCCC EECCHHHHHH HHHHHHHHHH HHC.......
CORE 80........ .....43000 2040000000 3200300000 000.......
151 162
T4endo_PSS CCEEECCCCC CC
T4endo_Seq TWYKYYGKAI YA
------------
2rslC0_Seq .......... ..
2rslC0_SS .......... ..
CORE .......... ..
MSF: 191 Type: P Check: 100 ..
Name: T4endo_PSS Len: 191 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 191 Check: 100 Weight: 1.00
Name: 1l58-0_Seq Len: 191 Check: 100 Weight: 1.00
Name: 1l58-0_SS Len: 191 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCE.
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPT.
------------ +++F-+ +R++- G-R --+-K-+--
1l58-0_Seq .......... .......... ....MNIFEM LRIDE..GLR LKIYKDTEGY
1l58-0_SS .......... .......... ....CCHHHH HHHHH..CCE EEEEECCCCC
CORE .......... .......... ....102002 30000..130 3080000000
50 100
T4endo_PSS EEEECCEEEE .......... .......... ....EEHHHH HHHHHHHHHH
T4endo_Seq FILGAGHVTF .......... .......... ....FYDKLE FLRKRQIELI
------------ +-+G+GH--- --D+-E -L-++++---
1l58-0_Seq YTIGIGHLLT KSPSLNAAKS ELDKAIGRNC NGVITKDEAE KLFNQDVDAA
1l58-0_SS EEEECCEEEE CCCCHHHHHH HHHHHHCCCC CCECCHHHHH HHHHHHHHHH
CORE 1093310061 0000100500 0900230001 0408000060 0610003004
100 150
T4endo_PSS HHHHHCCCCC C......CC. .CCCCCCCHH HHHHCCCCCC HHHHHHHHH.
T4endo_Seq AECLKRGFNI K......DT. .TVQDISDIP QEFRGDYIPH EASIAISQA.
------------ ---++R---+ K D- ++--I-++- Q---+--+-- +-S-+--Q+
1l58-0_Seq VRGILRNAKL KPVYDSLDAV RRCALINMVF QMGETGVAGF TNSLRMLQQK
1l58-0_SS HHHHHHCCHH HHHHHHCCHH HHHHHHHHHH HHCHHHHHHC HHHHHHHHHC
CORE 1006000008 0051004000 0014950472 0200009202 0016004000
151 191
T4endo_PSS HHHHH..HCC CCCCE..... .......... ....EECCCC C
T4endo_Seq RLDEK..IAQ RPTWY..... .......... ....KYYGKA I
------------ R+DE+ -+- +-+WY ++Y K- +
1l58-0_Seq RWDEAAVNLA KSRWYNQTAN RAKRVITTFR TGTWDAY.KN L
1l58-0_SS CHHHHHHHHH CCHHHHHCHH HHHHHHHHHH HCCCHHH.CC C
CORE 0000100040 0001000000 0000410150 0000000.00 0
MSF: 153 Type: P Check: 100 ..
Name: T4endo_PSS Len: 153 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 153 Check: 100 Weight: 1.00
Name: 1efuB1_Seq Len: 153 Check: 100 Weight: 1.00
Name: 1efuB1_SS Len: 153 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHH...H HHHHHHH... .......... HHHHHHHH..
T4endo_Seq MTRINLTLVS ELADQH...L MAEYREL... .......... PRVFGAVR..
------------ +-I+--LV- EL-++- + M---+-L -R+-GA+-
1efuB1_Seq .AEITASLVK ELRERTGAGM MDCKKALTEA NGDIELAIEN MRKSGAIKAA
1efuB1_SS .CCCCHHHHH HHHHHHCCCH HHHHHHHHHH CCCHHHHHHH HHHHHHHHHH
CORE .002000220 0500010100 0020044001 0102005100 2000000000
50 100
T4endo_PSS HHHCCCCCCC EEECCCEEEE ECCEEEEEEH HHHHHHH..H HHHHHHHHHH
T4endo_Seq KHVANGKRVR DFKISPTFIL GAGHVTFFYD KLEFLRK..R QIELIAECLK
------------ K---N--++- --K+++-++- G+ ++---- +-+F+-K + -+++-++-L+
1efuB1_Seq KKAGNVAADG VIKTKIDGNY GI..ILEVNC QTDFVAKDAG FQAFADKVLD
1efuB1_SS HHHCCCCCEE EEEEEEECCE EE..EEEEEE CCHHHHHCHH HHHHHHHHHH
CORE 0000000003 6000000000 04..070904 0000360001 6004400820
100 150
T4endo_PSS CCCCCCCCCC CCCCCHHHHH HCCCCCCHHH HHHHHHHHHH HHCCCCCCEE
T4endo_Seq RGFNIKDTTV QDISDIPQEF RGDYIPHEAS IAISQARLDE KIAQRPTWYK
------------ --+++K+T D++++- - +-E-+ ++---A+++E +I--R-- -+
1efuB1_Seq AAVAGKIT.. ....DVEVLK A....QFEEE RVALVAKIGE NINIRRV.AA
1efuB1_SS HHHHHCCC.. ....CHHHHH H....HHHHH HHHHHHHHCC CCEEEEE.EE
CORE 36100031.. ....030080 0....03000 0003100200 0608006.01
151
T4endo_PSS ECC
T4endo_Seq YYG
------------ +-G
1efuB1_Seq LEG
1efuB1_SS EEC
CORE 000
MSF: 144 Type: P Check: 100 ..
Name: T4endo_PSS Len: 144 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 144 Check: 100 Weight: 1.00
Name: 1srsB0_Seq Len: 144 Check: 100 Weight: 1.00
Name: 1srsB0_SS Len: 144 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHH....HHC CCCCCCEEEC
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRK....HVA NGKRVRDFKI
------------ TR----+-- E--D--L--+ -----R-+G- ++K -+- -G-+V----+
1srsB0_Seq .TRGRVKIKM EFIDNKLRRY TTFSKRKTGI MKKAYELSTL TGTQVLLLVA
1srsB0_SS .CCCCCCCCC CCCCCHHHHH HHHHHHHHHH HHHHHHHHHH HCCEEEEEEE
CORE .000000000 0000000000 0010000002 3009002500 0000956523
50 100
T4endo_PSS CCEEEEECCE E.EEEEHHHH ..HHHHHHHH HHHHHHCCCC CCCCCCCCCC
T4endo_Seq SPTFILGAGH V.TFFYDKLE ..FLRKRQIE LIAECLRGFN IKDTTVQDIS
------------ S+T GH V TF--+KL+ -+++---+ LI-+CL
1srsB0_Seq SET.....GH VYTFATRKLQ PMITSETGKA LIQTCL.... ..........
1srsB0_SS ECC.....CE EEEEECHHHH HHHHCHHHHH HHHHHC.... ..........
CORE 000.....00 4037530010 0170000000 040002.... ..........
101 144
T4endo_PSS CHHHHHHCCC CCCHHHHHHH HHHHHHHHCC CCCCEEECCC CCCC
T4endo_Seq DIPQEFRGDY IPHEASIAIS QARLDEKIAQ RPTWYKYYGK AIYA
------------
1srsB0_Seq .......... .......... .......... .......... ....
1srsB0_SS .......... .......... .......... .......... ....
CORE .......... .......... .......... .......... ....
MSF: 180 Type: P Check: 100 ..
Name: T4endo_PSS Len: 180 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 180 Check: 100 Weight: 1.00
Name: 1tbrR-_Seq Len: 180 Check: 100 Weight: 1.00
Name: 1tbrR-_SS Len: 180 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ +G+- --+-----++
1tbrR-_Seq .......... .......... .......... ......EGGE PCACPHALHR
1tbrR-_SS .......... .......... .......... ......CCCH HHEEECCCCC
CORE .......... .......... .......... ......0000 0001000000
50 100
T4endo_PSS EEECCEEEEE EHHHHHHHHH HHHHHHHHHH CCCCCCCCCC CCCCC..HHH
T4endo_Seq ILGAGHVTFF YDKLEFLRKR QIELIAECLK RGFNIKDTTV QDISD..IPQ
------------ +-G+-++T Y+----L+++ --+-+-E-- -+-D++- ++--D +-Q
1tbrR-_Seq VCGSDGET.. YSNPCTLNCA KFNGKPELV. ...KVHDGPC EPDEDEDVCQ
1tbrR-_SS EEECCCEE.. ECCHHHHHHH HHCCCCCCC. ...EEEECCC CCCCCCCCCH
CORE 64850102.. 4001018016 000000091. ...0600304 0000000110
100 150
T4endo_PSS HHHCC.CCC. ..CHHHHHHH HHHHH.HHHC CCCC.CEEEC CCCCCCCCCH
T4endo_Seq EFRGD.YIP. ..HEASIAIS QARLD.EKIA QRPT.WYKYY GKAIYYIPHE
------------ E+-GD Y-P -+-----+ +-RL+ +-I- ++P+ --K++ G+---
1tbrR-_Seq ECDGDEYKPV CGSDDITYDN NCRLECASIS SSPGVELKHE GPCRT.....
1tbrR-_SS HHCCCCCCCE EECCCEEECC HHHHHHHHCC CCCCCCEEEE CCCCC.....
CORE 0100000006 1431011400 0009018301 1401905000 10200.....
151 180
T4endo_PSS HHHHHHHHHH HHHHCCCCCC EEECCCCCCC
T4endo_Seq ASIAISQARL DEKIAQRPTW YKYYGKAIYA
------------
1tbrR-_Seq .......... .......... ..........
1tbrR-_SS .......... .......... ..........
CORE .......... .......... ..........
MSF: 179 Type: P Check: 100 ..
Name: T4endo_PSS Len: 179 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 179 Check: 100 Weight: 1.00
Name: 2psr-0_Seq Len: 179 Check: 100 Weight: 1.00
Name: 2psr-0_SS Len: 179 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ --- --E---+--- ---H--+++- -+-
2psr-0_Seq .......... .......SNT QAERSIIGMI DMFHKYTRRD DKI.......
2psr-0_SS .......... .......CCC HHHHHHHHHH HHHHHCCECC CEE.......
CORE .......... .......000 0000000020 0430011000 009.......
50 100
T4endo_PSS EEECCEEEEE EHHHHHH... HHHHHHHHHH HHHCCCC.CC C.....CCCC
T4endo_Seq ILGAGHVTFF YDKLEFL... RKRQIELIAE CLKRGFN.IK D.....TTVQ
------------ DK-++L +++--+++++ C-K+G-N ++ D -+-+
2psr-0_Seq .......... .DKPSLLTMM KENFPNFLSA CDKKGTNYLA DVFEKKDKNE
2psr-0_SS .......... .CHHHHHHHH HHHHHHHHHH HHHHCCCCCC HHHHHHCCCC
CORE .......... .000092075 0003002300 1000000230 0530000000
100 150
T4endo_PSS CCCCHHHHHH CCCCCCHHHH HHHHHHHHHH HCCCCCCHHH HHCCCCCCHH
T4endo_Seq DISDIPQEFR GDYIPHEASI AISQARLDEK IAQRPTWPQE FRGDYIPHEA
------------ D-+---+EF- +--- -I+-+--++- +++-P--
2psr-0_Seq DKKIDFSEFL ......SLLG DIATDYHKQS HGAAPCS... ..........
2psr-0_SS CCCECHHHHH ......HHHH HHHHHHHHHH HCCCCCC... ..........
CORE 0007000060 ......0820 0400000000 0000010... ..........
151 179
T4endo_PSS HHHHHHHHHH HHHCCCCCCE EECCCCCCC
T4endo_Seq SIAISQARLD EKIAQRPTWY KYYGKAIYA
------------
2psr-0_Seq .......... .......... .........
2psr-0_SS .......... .......... .........
CORE .......... .......... .........
MSF: 188 Type: P Check: 100 ..
Name: T4endo_PSS Len: 188 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 188 Check: 100 Weight: 1.00
Name: 1t1dA0_Seq Len: 188 Check: 100 Weight: 1.00
Name: 1t1dA0_SS Len: 188 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHCCCCC CCEEECCCEE
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVANGKR VRDFKISPTF
------------ -+-
1t1dA0_Seq .......... .......... .......... .......... .......ERV
1t1dA0_SS .......... .......... .......... .......... .......CEE
CORE .......... .......... .......... .......... .......004
50 100
T4endo_PSS EEECCEEEE. ........EE H...HHHHHH HHH....... .........H
T4endo_Seq ILGAGHVTF. ........FY D...KLEFLR KRQ....... .........I
------------ ++--+-+-F F- D -+++-R -R- -
1t1dA0_Seq VINVSGLRFE TQLKTLNQFP DTLLGNPQKR NRYYDPLRNE YFFDRNRPSF
1t1dA0_SS EEEECCEEEE EEHHHHHHCC CCHHHCHHHH HHHEECCCCE EEECCCCCHH
CORE 0904000040 4010080010 0229200000 0000000000 1050000025
100 150
T4endo_PSS HHHHHHHHCC CCCCCCCCCC CCCHHHHHHC CCCCCHHHHH HHHHHHHHHH
T4endo_Seq ELIAECLKRG FNIKDTTVQD ISDIPQEFRG DYIPHEASIA ISQARLDEKI
------------ ++I---++-G --++--+--- +++--+E-+ -Y---EA-++ --R-DE-+
1t1dA0_Seq DAILYFYQSG GRLRRPVNVP LDVFSEEIK. FYELGEAAFE ..RYRADEGF
1t1dA0_SS HHHHHHHHHC CCCCCCCCCC HHHHHHHHH. HHCCCHHHHH ..HHHHHHCC
CORE 0274042000 1060010020 000410050. 1207000310 ..01000000
151 188
T4endo_PSS HCCCCCCHHH HHHHHHHHHH HHCCCCCCEE ECCCCCCC
T4endo_Seq RGDYIPHEAS IAISQARLDE KIAQRPTWYK YYGKAIYA
------------
1t1dA0_Seq .......... .......... .......... ........
1t1dA0_SS .......... .......... .......... ........
CORE .......... .......... .......... ........
MSF: 170 Type: P Check: 100 ..
Name: T4endo_PSS Len: 170 Check: 100 Weight: 1.00
Name: T4endo_Seq Len: 170 Check: 100 Weight: 1.00
Name: 1bhdA0_Seq Len: 170 Check: 100 Weight: 1.00
Name: 1bhdA0_SS Len: 170 Check: 100 Weight: 1.00
//
1 50
T4endo_PSS CCEEEEEEHH HHHHHHHHHH HHHHHHHHHH HHHHHC.CCC CCCEEECC..
T4endo_Seq MTRINLTLVS ELADQHLMAE YRELPRVFGA VRKHVA.NGK RVRDFKIS..
------------ L--+ -+E---+--+ -++--+ ++- +V++F+-S
1bhdA0_Seq .......... ......LQQT NSEKILLSWV RQTTRPYSQV NVLNFTTSWT
1bhdA0_SS .......... ......CCCC HHHHHHHHHH HHHHCCCCCC CCCCCCCCCC
CORE .......... ......0000 0000031026 0012000001 0400300132
50 100
T4endo_PSS .......... ...CEEEEEC CEEEEEEHHH HHHHHHH.HH HHHHHHHCCC
T4endo_Seq .......... ...PTFILGA GHVTFFYDKL EFLRKRQ.IE LIAECLKRGF
------------ P -+F-+DK+ +--+-++ +E +--+--++++
1bhdA0_Seq DGLAFNAVLH RHKP...... ..DLFSWDKV VKMSPIERLE HAFSKAQTYL
1bhdA0_SS CCHHHHHHHH HHCC...... ..CCCCHHHH HHCCHHHHHH HHHHHHHHHH
CORE 0102901970 0000...... ..00100000 0000000050 0540070005
100 150
T4endo_PSS CCCCCCCCCC CCHHHHHHCC CCCCHHHHHH HHHHHHHHHC HHHHHHHHHH
T4endo_Seq NIKDTTVQDI SDIPQEFRGD YIPHEASIAI SQARLDEKIA ASIAISQARL
------------ +I + +++--E---+ --P-+-SI I ++--+---+-
1bhdA0_Seq GI.......E KLLDPEDVAV RLPDKKSI.I MYLTSLFEVL ..........
1bhdA0_SS CC.......C CCCCHHHHHH CCCCHHHH.H HHHHHHHHHC ..........
CORE 04.......0 0070100920 00200017.1 0280190025 ..........
151 170
T4endo_PSS HHHHCCCCCC EEECCCCCCC
T4endo_Seq DEKIAQRPTW YKYYGKAIYA
------------
1bhdA0_Seq .......... ..........
1bhdA0_SS .......... ..........
CORE .......... ..........