HHsearch 1.5 NAME d3bpda1 FAM FILE d3bpda1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d3bpda1.a3m DATE Mon Mar 8 16:08:00 2010 LENG 91 match states, 91 columns in multiple alignment FILT 20 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4175 0.2838 SEQ >ss_dssp CCSEEEEEEEEEEESCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEEEEEESSSCCCCCC >sa_dssp EEDCBBACACACADCECECECACDDADECECBECCECEDDEEDEDCBCACACADADDBDCECACCCADECDBDBDDDDCEBECEECEEEEE >ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHCCCEEEEEHHHEEHHHHCCCCC >ss_conf 9872499998546888878999999851288753899999710340268999980677978999999735823442112000012104689 >Consensus mxxirRiVLDvlKPxxpxiixxAxxlaxxxgvxxvxixVxEvDxxtxxxxItIeGxxidxDxIxxxIExxGgxIHSiDevxxGxxivexvx >d3bpda1 LKGLRRLVLDVLKPHEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDXGGVIHSVDEVVAGKIIVESVE >UniRef50_A8MAN4(8-92:92) Putative uncharacterized protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAN4_CALMQ E=5e-07 s/c=0.65 id=41% cov=93% ---LRRIVLDVDAPSELEIIKLASELGRITGVDAVYIKVEETDVGVLGLKV-IMEGSLDFNDVKKVIEVNGAVIRSIDEVSVGEYILK--- >UniRef50_C7NP35(1-89:95) Putative uncharacterized protein n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NP35_HALUD E=4e-19 s/c=1.08 id=44% cov=99% MSSIKRLVLDLLKPNEIENVEFARTLADLDGVEGANVSLLESDKDVQNLKITIEGESIENDTVASTIENLGGTIHSVDEVVCGDRMVEE-- >UniRef50_Q9HIZ3(7-95:99) Putative uncharacterized protein Ta1183 n=6 Tax=cellular organisms RepID=Q9HIZ3_THEAC E=2e-16 s/c=0.97 id=38% cov=98% ---IRRVVLDVDKGlNRPTLVELAAAIEKVQGVEAVNIIVTEMDMETMGTNITVEGTNINYDELIETIENTGSAIHSVDEIAVGKRLIENVR >UniRef50_B8D4D9(5-93:97) Putative uncharacterized protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4D9_DESK1 E=8e-15 s/c=0.92 id=44% cov=98% ---LKRIVLDVLYPVRGvSIIDLAKSIIEISGINSVSITVKEVDVDTQNILVIIEGINIDYDDVRKIIEKEGGVIHSIDQVVAGEKIIEPPE >UniRef50_D2EFY6(3-82:90) Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFY6_9EURY E=3e-07 s/c=0.70 id=34% cov=88% ---LSRLVIDAVKPIgEYTIIDLANDIARYVKNGDVFIKVVEVDIHTEGLKVVIEGSKINFDGIQKALKDRGTVINSLDEATV--------- >UniRef50_Q6AKG0(1-82:88) Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKG0_DESPS E=6e-20 s/c=1.20 id=39% cov=91% MTKTRRVVLDVLKPHQPNALDFSSTLADLGGDYRIKLTVTEVDKNTESTIVTIEGADINFENIKTAIEKMGASVHSIDEVEV--------- >UniRef50_UPI00016990F7(16-87:87) hypothetical protein Epers_20243 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016990F7 E=9e-17 s/c=1.22 id=30% cov=80% MVKVQRIVLDVLKPHSPNGLEFSTQLAKKCPDCWFNFKVVEVDEKTETVILVVESENIPYDDVSDAITSMGG------------------- >UniRef50_B1L7I5(16-94:101) Putative uncharacterized protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7I5_KORCO E=2e-14 s/c=1.01 id=38% cov=88% ---IRKLVLDVVKPHEPDIVEVADAISKLDGVKKVEVEVRDYDSNIERLKLIVEGDDLDEDDIMELIKYYGGNVASVDGVTV--------- >UniRef50_A8A9T6(1-83:85) Uncharacterized protein-like protein n=2 Tax=Desulfurococcaceae RepID=A8A9T6_IGNH4 E=1e-12 s/c=0.90 id=35% cov=91% MGRLTKVVLDAVKPIKgPSIVDVSKELADAGGVGKVIIRVDEVDVGSITMTITIEGNDIDFDKVVDVLERLGVVIHSIDEAEA--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 3483 135 * * * * * * * * * 1 0 * * * * * * 2751 0 0 K 2 2360 * * * * 3124 * * 2710 * * 3742 * * * 2464 3543 2352 * * 2 0 * * * * * * 2771 0 0 G 3 * * 3321 * * 1134 * * 2605 * * 3482 * * 3313 3475 * * * * 3 0 * * * * * * 2962 0 0 L 4 4025 * * * * * * 1411 * 1303 * * * * * * 4471 3156 * * 4 0 * * * * * * 3473 0 0 R 5 * * * * * * * 4598 2726 * * * * 4171 724 3988 3578 * * * 5 0 * * * * * * 3473 0 0 R 6 * * * * * * * * 2751 * * * * 4072 336 * * * * * 6 0 * * * * * * 3473 0 0 L 7 * * * * * * * 1297 * 1270 * * * * * * * 2488 * * 7 0 * * * * * * 3473 0 0 V 8 * * * * * * * * * 4072 * * * * * * 3899 195 * * 8 0 * * * * * * 3473 0 0 L 9 * * * * 3899 * * 3119 * 290 * * * * * * * * * * 9 0 * * * * * * 3473 0 0 D 10 * * 0 * * * * * * * * * * * * * * * * * 10 0 * * * * * * 3473 0 0 V 11 2330 * * * * * * 3709 * 4376 * * * * * * * 564 * * 11 0 * * * * * * 3473 0 0 L 12 4263 * 2093 * * * * * * 994 * * * * * * * 2241 * * 12 0 * * * * * * 3473 0 0 K 13 4094 * * * * * * 4263 246 * * * * * * * * * * 4435 13 0 * * * * * * 3473 0 0 P 14 2983 * * * * 4341 * * * * * * 279 * * * * * * * 14 126 3575 * 0 * * * 3473 1477 0 H 15 * * * * * * 1192 2768 3412 * 3899 3358 * * * 4094 4263 4435 * * 15 201 2943 * 0 * * * 3473 1660 0 E 16 * * 2686 1363 * * * * 2880 * * * * 2566 3387 4171 * * * * 16 148 3356 * 0 * * * 3473 1587 0 P 17 * * * * * 2797 * 4376 * 4094 * * 543 * * * * * * 3988 17 149 3346 * 0 * * * 3473 1448 0 K 18 * * 3009 3228 * * * 4598 3756 * * 2668 3225 * * 2662 2111 * * * 18 0 * * * * * * 3473 0 0 T 19 3296 * * * * 4171 * 836 * 3174 * 3520 * * * 4457 4686 * * * 19 0 * * * * * * 3473 0 0 I 20 * * * * * * * 1987 * 2156 * * 4598 * 4025 * 3402 1617 * * 20 0 * * * * * * 3473 0 0 V 21 * * 1430 1375 * * * * 3059 4681 * * * * * * * 3567 * * 21 0 * * * * * * 3473 0 0 F 22 * * 4457 * 1710 * * 2983 * 1965 4829 * * * * * * 2399 * 4598 22 0 * * * * * * 3473 0 0 A 23 407 * * * * * * * * * * * * * * 2849 4025 4457 * * 23 0 * * * * * * 3473 0 0 L 24 4341 * 3948 4025 * * * * 2492 3203 * 3988 * 3899 3253 2745 3121 4681 * * 24 0 * * * * * * 3473 0 0 K 25 2055 * 3988 2447 * * 4025 * 2657 * * * * 4171 * 4435 2737 * * 4598 25 67 4457 * 0 * * * 3473 1000 0 L 26 * * * * * * * 1095 * 910 * * * * * * * * * * 26 0 * * * * * * 3473 0 0 S 27 1158 * * 3200 * 4094 3899 4435 * * * * * * * 2443 4829 * * 4263 27 0 * * * * * * 3473 0 0 E 28 * * 2068 2171 * 3899 * * 1964 * * * * * 3040 3402 * * * * 28 0 * * * * * * 3473 0 0 L 29 2784 3899 * * * * * 2606 4171 1871 4681 * * * * * 4140 2879 * 3988 29 0 * * * * * * 3473 0 0 E 30 * 4171 3146 1996 * 2430 * * * * * * 3299 4341 4598 3618 4094 3988 * * 30 0 * * * * * * 3473 0 0 N 31 * * * * * 759 * * 3988 * * 3145 4171 4072 * * 4025 4140 * * 31 0 * * * * * * 3473 0 0 V 32 * * 2668 * * * * 3618 * * * 3988 * * * * * 518 * * 32 0 * * * * * * 3473 0 0 D 33 * 4171 2366 2076 * 2768 * * 3097 * * 4435 * 4856 * 3899 * * * 3296 33 0 * * * * * * 3473 0 0 G 34 1794 * 3988 * * 1754 * * 2751 * * * * * 3296 4435 * * 4171 * 34 0 * * * * * * 3473 0 0 V 35 3190 * * * 3029 * * 4471 * 4072 * * * * * * * 592 * * 35 0 * * * * * * 3473 0 0 N 36 * * * 3948 3988 * * 3578 3296 * * 1290 * * 4263 3242 4025 * * 4094 36 0 * * * * * * 3473 0 0 I 37 * * * * 4171 4025 * 793 * 2828 * * * * * * * 2599 * * 37 0 * * * * * * 3473 0 0 H 38 * * * 3948 * * 4686 3237 2498 4681 * * * * 3578 3190 1637 4072 * * 38 0 * * * * * * 3473 0 0 L 39 * * * * * * * * * 2128 * * * * * * * 375 * * 39 0 * * * * * * 3473 0 0 S 40 * * 2880 4094 * * * 4025 4435 3253 4598 3412 * * 3269 3239 3404 3077 * 4829 40 0 * * * * * * 3473 0 0 E 41 * * 3097 293 * * * * * * * 3899 * * * * * * * * 41 0 * * * * * * 3473 0 0 I 42 * * * * * * * 1744 * 4025 3501 * * * * 4376 4094 1395 * 3948 42 0 * * * * * * 3473 0 0 D 43 * * 0 * * * * * * * * * * * * * * * * * 43 0 * * * * * * 3473 0 0 Q 44 * * * 3156 * * * 2943 2559 * 3200 * * 2844 * 3948 * 1862 * * 44 0 * * * * * * 3473 0 0 A 45 4686 * 2771 1522 * 2813 3988 * 4171 * * 2282 * * * * * * * * 45 0 * * * * * * 3473 0 0 T 46 * * * * * * * 3948 * * * * * * * 3578 664 2183 * * 46 0 * * * * * * 3473 0 0 E 47 * * * 1186 * * * 3578 * 2784 4341 * * 2682 * * * 2983 * * 47 0 * * * * * * 3473 0 0 N 48 * * * * * 1517 * * * * * 1883 * * 3948 3650 2090 * * * 48 0 * * * * * * 3473 0 0 I 49 * * * * * * * 2984 * 1473 2250 * * * * * 3404 2260 * * 49 0 * * * * * * 3473 0 0 K 50 4263 * 3899 4072 * * * 3313 1151 4435 * 4341 * 4140 * * 3080 * * * 50 0 * * * * * * 3473 0 0 I 51 * * * * * * * 847 * 3055 * * * * * * * 1626 * * 51 87 * 4094 * * * * 3473 0 0 T 52 * * * * * * * 3076 * * * * * 4053 * * 737 2178 * * 52 0 * * * * 0 * 3407 0 1000 I 53 * * * * * * * 735 * 4140 * * * * * * * 1545 * * 53 0 * * * * * * 3473 0 0 L 54 * * * 517 4140 * * * * 4686 4094 * * 4598 * * * 3238 * * 54 0 * * * * * * 3473 0 0 G 55 * * * 4094 * 175 * * * * * * * * * 4171 * * * * 55 0 * * * * * * 3473 0 0 N 56 4471 * 2284 3270 * 4094 * 3242 * * * 2329 * * * 3062 3174 4263 * * 56 0 * * * * * * 3473 0 0 N 57 4025 * 1764 4140 * * * * 3988 * * 1512 * * * 3228 * * * 3899 57 0 * * * * * * 3473 0 0 L 58 * * * * * * * 1052 * 1103 * * * * * * * 4263 * * 58 0 * * * * * * 3473 0 0 D 59 * * 723 3596 * * * * * * * 2348 3121 * * * * * * * 59 0 * * * * * * 3473 0 0 Y 60 * * * 3948 1129 * 3899 * * * * 4376 * * * * * * * 1462 60 0 * * * * * * 3473 0 0 E 61 * * 436 3574 * * * * * * * 3117 * * * * * 4025 * * 61 0 * * * * * * 3473 0 0 Q 62 4025 * 1813 2491 * 3358 * * 3026 * * 4471 * 4686 3899 * 3253 * * * 62 0 * * * * * * 3473 0 0 I 63 * * * * * * * 891 * 2569 * * * * * * * 1775 * * 63 0 * * * * * * 3473 0 0 K 64 4376 * * 3139 * * * 4341 2811 * 3948 * * 2691 3062 4171 4598 2250 * * 64 0 * * * * * * 3473 0 0 G 65 * * 2844 1848 * 4686 * * 1950 * * 4072 * * 3721 3253 4471 * * * 65 0 * * * * * * 3473 0 0 V 66 1184 * * * * * * 3054 * 3948 * * * * * 4025 3358 2213 * * 66 0 * * * * * * 3473 0 0 I 67 * * * * * * * 598 * 1876 3899 * * * * * * * * * 67 0 * * * * * * 3473 0 0 E 68 * * * 396 * * * * 2968 * * * * * * * 3156 * * * 68 0 * * * * * * 3473 0 0 D 69 * * 3295 3766 * * * * 2301 * * 1823 * * 3578 2922 * 4094 * 3948 69 0 * * * * * * 3473 0 0 X 70 * * * 4380 4564 * * * * 2058 2610 4046 * * 3940 * 2471 3487 * 3178 70 0 * * * * * * 3471 0 0 G 71 * * * * * 0 * * * * * * * * * * * * * * 71 0 * * * * * * 3473 0 0 G 72 1719 * * * * 999 * * * * * * * * * 4341 3988 3578 * * 72 0 * * * * * * 3473 0 0 V 73 2668 * * * * * * * * * * 3865 * * * 2665 2719 1107 * * 73 0 * * * * * * 3402 0 0 I 74 * * * * * * * 822 * 3946 * * * * * * * 1437 * * 74 0 * * * * * * 3402 0 0 H 75 3865 * * * * * 317 * * * * 3908 * * 4007 * * * * * 75 0 * * * * * * 3402 0 0 S 76 * * * * * * * * * * * * * * * 0 * * * * 76 0 * * * * * * 3402 0 0 V 77 * * * * * * * 1182 * 2945 * * * * * * * 1219 * * 77 0 * * * * * * 3402 0 0 D 78 * * 0 * * * * * * * * * * * * * * * * * 78 0 * * * * * * 3402 0 0 E 79 * * * 623 * 3865 * * * * * * * 1826 * * * * * * 79 0 * * * * * * 3402 0 0 V 80 2689 * * * * * * 2628 * 3984 * * * * * * * 690 * * 80 0 * * * * * * 3402 0 0 V 81 3115 * * 2303 * * * * * 3984 * * * * * 4007 2886 1247 * * 81 0 * * * * * * 3402 0 0 A 82 1328 3052 * * * * * * * * * * * * * * * 1262 * 3961 82 0 * * * * * * 3402 0 0 G 83 * * * * * 0 * * * * * * * * * * * * * * 83 0 * * * * * * 2903 0 0 K 84 * * 3687 1299 * * * * 1789 * * * * * 2908 3419 * * * * 84 0 * * * * * * 2903 0 0 I 85 * * 3419 * * * * 3990 1521 * * * * * 2676 * 3899 * * 1880 85 0 * * * * * * 2903 0 0 I 86 * * * * 4019 * * 682 * 3665 2081 * * * * * * * * * 86 0 * * * * * * 2903 0 0 V 87 * * * * * * * 1740 * 3381 * * 3524 * * * * 950 * * 87 0 * * * * * * 2903 0 0 E 88 * * * 300 * * * * 3381 * * * * * * * 3447 * * * 88 0 * * * * * * 2903 0 0 S 89 3032 * * 1897 * * * * * * * 3270 2228 * 3124 2496 * * * * 89 0 * * * * * * 2704 0 0 V 90 * * * * * * * 2754 * * * * 2810 * * * * 496 * * 90 0 * * * * * * 2424 0 0 E 91 * * * 1333 * * * * 2396 * * * * * 1275 * * * * * 91 0 * * 0 * * * 2039 0 0 //