HHsearch 1.5 NAME d2r7ka1 FAM FILE d2r7ka1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2r7ka1.a3m DATE Tue Mar 9 07:14:04 2010 LENG 123 match states, 123 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4190 0.9573 SEQ >ss_dssp CCCHHHHHHHHTTSCTTSCEEEEESSTTHHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSSGGGGGSHHHHHHHHHTTEEECCCHHHHHHHC HHHHHHTCCSCBSSCGGGGGSCC >sa_dssp EBDEEDBDECCDEBDDEECBCAAAABECADECADDBDEEEDDAAAAACEEDBDDBDEEEBBDDCADBEEADCACDDEBADDACECBACBCCBDCABEDAC CECAADDACABBEEEBDECDEEE >ss_pred CCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCEEEEEECCHHHHHCHHHHHHHHHCCEEEEECCCHHHHHC HHHHHHHCCCCCCCCCEEEEEEC >ss_conf 9877899999832483452799875223789973276619608999835864013306731038896245774089989999744908971643452108 47766432686023412776509 >Consensus mixrxeixxilxxYdxxxixIxtixSHSaLqIxxGAKdEGFrTixixxxxrexxYxxfxxxDxxIxvdxfxdilxeeiqxxLxxxnxIxIPhgSfvxYvG xdxiExxxxvPxFGNrxxLrwEs >d2r7ka1 MISKDEILEIFDKYNKDEITIATLGSHTSLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDNFSDIKNEEIQEKLRELNSIVVPHGSFIAYCG LDNVENSFLVPMFGNRRILRWES >UniRef50_Q64BC7(1-129:375) Putative uncharacterized protein n=2 Tax=environmental samples RepID=Q64BC7_9ARCH E=8e-24 s/c=0.86 id=45% cov=100% MIGRKEIKEVLNGYELDEVIIGVLGSHSALDICRGAKDMGFRTLVVCQKGREKTYDHYyrtenscGVVDQTIVLDKFSDITEESVLRQMRENNVIFIPHR SFEVYVGFDRIEDDFLLPLFGSRSMLRAE- >UniRef50_A9A1D3(3-105:341) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=4 Tax=Archaea RepID=PURP_NITMS E=3e-21 s/c=0.99 id=46% cov=85% -------------------SIATLGSHCSLQVLKGAKDEGLKTILVCEKKREKLYRRFPFIDELIIVDKFREVLDEKVQSTLEQNDAVLIPHGTLIAQMS SDEIE-SIKTPIFGNKWILRWES >UniRef50_B1L3X7(1-124:366) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=PURP_KORCO E=2e-37 s/c=1.26 id=44% cov=100% MIPRERILSVLSKYDESDVKIGTICSHSSLQIFNGARREGLRSVGIVLRENKPYYESFPRAspDIFIEVDSYGDLLSEETQEELISENVIMIPHGSFVEY VGSENILERFRVPMFGNRLTLYWE- >UniRef50_Q12X62(1-135:385) 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase n=14 Tax=cellular organisms RepID=Q12X62_METBU E=1e-36 s/c=1.13 id=40% cov=100% MIDRKEIIEIAESYYTDDIKIGTVASHSGLDVFDGAIEENFETFAICQAGREKTYTEYfkskrdangnvvrGIVDDHVVYDKFNELMLPENQQKLVDDNV LFIPNRSFTSYCDIDEVENDFRVPMVGSRNMLRSE- >UniRef50_B8D424(1-123:369) IMP biosynthesis enzyme PurP-like protein n=10 Tax=Thermoprotei RepID=B8D424_DESK1 E=1e-35 s/c=1.22 id=35% cov=100% MSTRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNtVIDEYIILDSFKDVVKPSAMDYLAGKNAIIVPNRSFSVYV GYDAIESELRIPVFGNKYLLRYE- >UniRef50_Q980P7(1-101:337) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=9 Tax=Sulfolobus RepID=PURP_SULSO E=5e-17 s/c=0.88 id=38% cov=81% --------------------IATIGSHSALQILHGAKKEGFQTMVITDNKRENFYKNFSFIDNIYAYASLDEAV--SIINGIKDYG-ILIPHGSLVEYLG KERV-DKIETKIFGNKKIFEWEA >UniRef50_A8A9M3(2-119:347) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=10 Tax=Thermoprotei RepID=PURP_IGNH4 E=3e-34 s/c=1.24 id=38% cov=96% -----RVTDVLKEYDLSKLTVATVASHSALQIVHGAKKEGLRTLLIVKKDRYEFYSSFsHLVDSFIIVESWKEVLNEDVVNELLASNAVLVPHGSFVEYV GAQGLLD-YPVPIFGSRKILLWES >UniRef50_Q9V0I8(6-102:337) 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=4 Tax=Thermococcaceae RepID=PURP_PYRAB E=4e-26 s/c=1.23 id=42% cov=80% ------------------VRIATYASHSALQILKGAKDEGFETIAFGSERVKPLYTKYFPVADYFLVGKYPE-------DELLELNAVVIPTGSFVAHLG VELVE-RMKVPYFGNKRVLKWES # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 159 * * * * * * 3262 * * 1 0 * * * * * * 2673 0 0 I 2 * * * * * * * 364 * * * * * * * 3072 * 3263 * * 2 0 * * * * * * 2673 0 0 S 3 * * 3014 * * 3331 * * * * * * 3002 * * 1246 2119 * * * 3 170 * 3167 * * * * 2673 0 0 K 4 * * * * * * * * 1691 * * * * * 535 * * * * * 4 0 * * * * 0 * 2660 0 1000 D 5 * * 1229 2323 3380 * * * 2398 * * * * * * * * 3510 * * 5 0 * * * * * * 2762 0 0 E 6 * * * 842 * * * * 2565 * * 3488 * * 2443 * * * * * 6 0 * * * * * * 2875 0 0 I 7 * * * * * * * 538 * * 3908 * 3632 * * * * 2607 * * 7 0 * * * * * * 2926 0 0 L 8 3800 * 3732 * * * * 3383 2897 1708 * 3795 * * 2618 * 3611 * * * 8 0 * * * * * * 2926 0 0 E 9 * * 2621 1151 * * * * 3604 * * * * 3795 3800 2634 * * * * 9 0 * * * * * * 2926 0 0 I 10 * * * * * * * 1243 * 2251 * * * * * * * 1444 * * 10 0 * * * * * * 2934 0 0 F 11 2737 * * * 3916 * * 3731 * 959 * * * * * * * 2366 * * 11 0 * * * * * * 2934 0 0 D 12 2903 * 3916 1756 * * * * 2763 * * 2306 * * 3765 3628 * * * * 12 0 * * * * * * 2934 0 0 K 13 * * 2876 3687 * 1832 3731 * 2206 * * 3986 * * * 2737 * * * * 13 0 * * * * * * 2934 0 0 Y 14 * * * * * * * * * * * * * * * * * * * 0 14 91 * 4029 * * * * 2934 0 0 N 15 * * 898 2143 * * * * * * * 3861 * * * 3783 * * * 3390 15 119 * 3662 * * * 0 2918 0 1000 K 16 * * * 3477 * 3647 * * 1680 2029 * * 3501 * * * 2435 * * * 16 113 * 3731 * * 1000 1000 2863 0 1139 D 17 3630 * 2012 * * 2550 * * 3623 * * 3697 * * 2585 2508 * * * * 17 0 * * * * 0 * 2916 0 1405 E 18 * * 1775 2330 * * * * 2249 * * 2163 * * 3731 * * * * * 18 0 * * * * * * 2934 0 0 I 19 * * * * * * * 1387 * 2445 * * 4251 * * * * 1391 * * 19 0 * * * * * * 2993 0 0 T 20 2589 * * * * * 4000 4138 2753 * * * * * 3779 3269 1360 * * * 20 0 * * * * * * 3007 0 0 I 21 * * * * * * * 147 * * * * * * * * * 3371 * * 21 0 * * * * * * 3150 0 0 A 22 1113 4311 * * * 1229 * * * * * * * * * 4046 * * * * 22 0 * * * * * * 3150 0 0 T 23 3442 * * * * * * 3445 * * * * * * * * 476 3361 * * 23 0 * * * * * * 3150 0 0 L 24 * * * * 3445 * * 1781 * 1833 * * * * * * * 1869 * 3996 24 0 * * * * * * 3150 0 0 G 25 1350 3087 * * * 1029 * * * * * * * * * * * * * * 25 0 * * * * * * 3150 0 0 S 26 * * * * * * * * * * * * * * * 69 4410 * * * 26 0 * * * * * * 3150 0 0 H 27 * * * * * * 0 * * * * * * * * * * * * * 27 0 * * * * * * 3150 0 0 T 28 * 3500 * * * * * * * * * * * * * 204 4520 * * * 28 0 * * * * * * 3150 0 0 S 29 598 * * * * 3788 * * * * * * * * * 1905 * * * * 29 0 * * * * * * 3150 0 0 L 30 * * * * * * * * 3445 139 * * * * * * * * * * 30 0 * * * * * * 3150 0 0 H 31 * * 2219 2849 * * 3412 * * * * 4259 * 999 * * * * * * 31 0 * * * * * * 3150 0 0 I 32 * * * * * * * 729 * 4529 * * * * * * * 1501 * * 32 0 * * * * * * 3150 0 0 L 33 * 4313 * * 1589 3445 * * * 1420 4284 * * * * 4410 * 4227 * * 33 0 * * * * * * 3150 0 0 K 34 * * 2605 * * * 2139 * 2018 4046 3445 4020 * * 2759 * * * * * 34 0 * * * * * * 3150 0 0 G 35 4430 * * * * 139 * * * * * * * * * 4461 * * * * 35 0 * * * * * * 3150 0 0 A 36 0 * * * * * * * * * * * * * * * * * * * 36 0 * * * * * * 3150 0 0 K 37 * * * * * * * 3788 294 * * * * * 4020 * * * * 4311 37 0 * * * * * * 3150 0 0 L 38 3445 * 990 3788 * * * * 2548 4520 * * * 4158 4020 * * * * * 38 0 * * * * * * 3150 0 0 E 39 * * * 221 * * * * * * 4313 * * * * * * * 3445 * 39 0 * * * * * * 3150 0 0 G 40 * * * * * 108 * * * * * 3788 * * * * * * * * 40 0 * * * * * * 3150 0 0 F 41 * * * * 252 * * * * 2642 * * * * * * * * * * 41 0 * * * * * * 3150 0 0 S 42 * * * 2888 * * * * 2472 * * * * 3916 1085 3384 4284 * * * 42 0 * * * * * * 3150 0 0 T 43 * * * * * * * * * * * * * * 4311 4020 171 * * * 43 0 * * * * * * 3150 0 0 V 44 * 4311 * * 3788 * * 1764 * 2274 3916 * * * 4046 * * 2004 * * 44 0 * * * * * * 3150 0 0 C 45 1850 3384 * * * 3087 * 4430 * 1979 * * * * * * * 2259 * * 45 0 * * * * * * 3150 0 0 I 46 * * * * 3996 * * 992 * * * * * * * * * 1419 * 4046 46 0 * * * * * * 3150 0 0 T 47 4284 975 * * * 3996 * * * * * * * * * * 3187 1903 * * 47 0 * * * * * * 3150 0 0 M 48 4311 * 3916 3500 * * * 4158 3133 3146 4520 * * 1500 4259 3996 * * * * 48 0 * * * * * * 3150 0 0 K 49 3788 * * 3121 * 4158 * * 1602 * * 3916 4046 * 1990 * * 4360 * * 49 0 * * * * * * 3150 0 0 G 50 * * 3255 3033 * 1160 * * 2693 * * * 4158 * 3121 * * * * * 50 0 * * * * * * 3150 0 0 R 51 * * * 4259 * * * * * * * 4020 4158 * 382 * * 3996 * * 51 0 * * * * * * 3150 0 0 D 52 4284 * 2885 1099 * * * * 2502 * * * 4158 * 4046 * * * * 4227 52 0 * * * * * * 3150 0 0 V 53 4046 * * 4227 * * * * 1161 * * 3916 3008 * 3279 * * 3412 4284 * 53 0 * * * * * * 3150 0 0 P 54 * * * * 1798 * * * * 2042 * * 2865 * * * 2195 4259 * 4020 54 0 * * * * * * 3150 0 0 Y 55 * * * * * * * * * * * * * * * * * * * 0 55 0 * * * * * * 3150 0 0 K 56 4046 * 3233 3134 * * * 4529 3187 * 4360 * * 4311 2839 3316 2140 * * * 56 0 * * * * * * 3150 0 0 R 57 4158 * 4284 3788 * * 4313 * 2338 * * 3916 * * 1846 2134 * * * * 57 0 * * * * * * 3150 0 0 F 58 * * * * 954 * * * * 4360 * * * * * * 4046 * * 1417 58 552 1654 * 2614 257 * * 3150 2350 0 K 59 * * * * 3996 2172 3255 * 2865 * * 2831 2619 * 3267 3916 * * * * 59 218 2831 * 687 1400 * * 3150 1537 0 V 60 * * * * 2693 * * 3066 * 1675 * * 3996 * 4020 4311 * 2070 * * 60 0 * * * * * * 3150 0 0 A 61 1922 * * * * * * 1729 * * * * * * * * 4046 1826 * 3445 61 181 3087 * 1000 1000 * * 3150 1381 0 D 62 3996 * 173 4311 * * * * * * * * * * * * * * * * 62 0 * * * * * * 3150 0 0 K 63 4158 * 2888 1217 * * * 4020 3384 4284 * 3916 * 4313 * 4227 * * * * 63 0 * * * * * * 3150 0 0 F 64 * 4529 * * 1463 * 3788 3089 * 2747 * * * * * * 4313 3420 * 3166 64 0 * * * * * * 3150 0 0 I 65 * * * * 3996 * * 544 * * * * * * * * * 2433 * 3916 65 0 * * * * * * 3150 0 0 Y 66 3916 * * 3146 * * * 1795 * 3238 3369 * * * * 4158 * 2119 * 4520 66 0 * * * * * * 3150 0 0 V 67 * * * * * * * * * 1782 * * * * * * 4046 971 * 2851 67 0 * * * * * * 3150 0 0 D 68 3916 * 942 2018 * 3996 * * * * * 4284 * * * 4259 * * * * 68 0 * * * * * * 3150 0 0 N 69 * * 3148 * * * * * 1260 * * 4520 * * 3495 1568 * * * * 69 0 * * * * * * 3150 0 0 F 70 * * * * 1022 * * * * 3916 4046 * * * * * * * 3255 1858 70 0 * * * * * * 3150 0 0 S 71 * * 3916 * * 4020 * * 1770 * * 3788 3996 * 2801 1735 * * * * 71 0 * * * * * * 3150 0 0 D 72 3101 * 777 1738 * * * * * * * * * * * * * * * * 72 93 * 3996 * * * * 3150 0 0 I 73 3827 * * * * * * 1459 * 2320 3223 * * * * * * 1952 * * 73 0 * * * * * 0 3080 0 1000 K 74 * 4199 * * * * * 4388 4428 1010 3703 4199 * * * * 4254 2546 * * 74 105 * 3827 * * * 0 3080 0 1000 N 75 * * 2071 4146 * * * * 2426 3609 * 1651 * * 4337 3842 * * * * 75 0 * * * * * 0 2996 0 1488 E 76 * * 3041 788 * * * * * * * * 2344 4275 4296 * * * * * 76 208 * 2896 * * 944 1058 2996 0 1488 E 77 * * 3057 1012 * * * * 3098 * * 3897 * * * 2321 * * * * 77 0 * * * * * 0 2959 0 1735 I 78 4083 * * * * * * 1211 * * * 3572 * * * * 3639 1536 * * 78 0 * * * * 1485 638 2959 0 1735 Q 79 * * * * * * * 3723 * 4150 4172 * * 669 * 3931 * 3081 * * 79 0 * * * * 971 1029 3017 0 1385 E 80 * * 2134 1439 * * * * * * * 2977 * 2961 3328 4370 * * * * 80 0 * * * * * 0 3102 0 1000 K 81 * * * 1515 * 3822 * * 1916 * * * * 3226 3222 * 4370 * * 4267 81 0 * * * * * 0 3102 0 1000 L 82 * * * * * * * 3063 * 275 4220 * * * * * * * * * 82 0 * * * * * 0 3102 0 1000 R 83 4267 * * 4370 * * * 2981 3094 2530 * * * * 1295 * * 3733 * * 83 0 * * * * * 0 3102 0 1000 E 84 4151 * 1941 1473 * 3235 4137 * * * * * * 3399 * 3935 * * * * 84 0 * * * * * 0 3102 0 1000 L 85 * * 3733 2535 * * * * 4267 2184 3299 3293 * 4429 4354 4151 * * * 3000 85 0 * * * * 0 * 3102 0 1000 N 86 4529 * 2747 * * 3916 * * * * * 431 * * * * * * * * 86 99 * 3916 * * * * 3150 0 0 S 87 1212 * * * * 3939 * * * * * * * * * 4408 1938 2359 * * 87 0 * * * * 0 * 3074 0 1000 I 88 * * * * * * * 482 * 3788 * * * * * * * 2241 * * 88 0 * * * * * * 3150 0 0 V 89 * * * * 1956 * * 2689 * 1480 4020 * * * * * * 2584 * * 89 0 * * * * * * 3150 0 0 V 90 * * * * * * * 594 * * * * * * * * * 1566 * * 90 0 * * * * * * 3150 0 0 P 91 * * * * * * * * * * * * 0 * * * * * * * 91 0 * * * * * * 3150 0 0 H 92 * * * * * * 554 * * * * 1965 * * * * 3996 * * * 92 0 * * * * * * 3150 0 0 G 93 * * * * * 629 * * * * * * * * 1500 * * * * * 93 0 * * * * * * 3150 0 0 S 94 * * * * * 4410 * * * * * * * * * 210 3500 * * * 94 0 * * * * * * 3150 0 0 F 95 * * * * 430 * * * * 2310 4158 * * * * * * * * * 95 0 * * * * * * 3150 0 0 I 96 2888 4410 * 4313 * * * 2922 * * * 4259 * * * 4360 3788 1113 * * 96 0 * * * * * * 3150 0 0 A 97 1483 * * 1793 * * * * * * * * * * * 3788 * 1830 * * 97 0 * * * * * * 3150 0 0 Y 98 * * * * * * 3996 * * * * * * 3500 * * * * * 236 98 0 * * * * * * 3150 0 0 C 99 * 3108 * * * * * 4259 * 2026 3500 * * * * * * 1006 * * 99 0 * * * * * * 3150 0 0 G 100 * * 3788 * * 253 * * * * * * * * * 3500 * * * * 100 0 * * * * * * 3150 0 0 L 101 4227 * * * 4313 * * 2961 3078 2280 * * * * * 2736 * 3996 * 2115 101 0 * * * * * * 3150 0 0 D 102 * * 1166 1348 4259 * * * * * * * * 3192 * * * * * * 102 77 * 4259 * * * * 3150 0 0 N 103 2784 4223 * 2217 * 3260 * * * 3901 * 2525 * * 2052 * * * * * 103 0 * * * * * 0 3123 0 1000 V 104 * * * * 4082 4223 * 811 * 4155 * * * * * * * 1935 * * 104 106 * 3818 * * * 0 3123 0 1000 E 105 * * * 203 * * * * * 2930 * * * * * * * * * * 105 510 * 1748 * * 0 * 3038 0 1483 N 106 * * 1694 3544 * * * * 2318 * * 1826 * 4137 * 3922 * * * * 106 122 * 3625 * * 0 * 2954 0 2146 S 107 3013 * 2479 2785 * * * * 3094 * * * * * 2914 1728 * * * * 107 94 * 3991 * * 0 * 3119 0 1000 F 108 * * * * 1195 * * 2186 * 2191 3872 * * * * * * * * 4151 108 0 * * * * 0 * 3102 0 1000 L 109 * * * 2312 * * * * 2570 2347 * 3402 3192 * 2452 * * * * 4410 109 0 * * * * * * 3150 0 0 V 110 4046 * * * * * * 3385 * 3286 * * * * * * 2693 770 * * 110 0 * * * * * * 3150 0 0 P 111 * * * * * * * * 3916 * * * 196 * 4046 * * * * * 111 0 * * * * * * 3150 0 0 M 112 * * * * 4046 * * 1720 * 3298 1835 * * * * * 4158 2886 * 3996 112 0 * * * * * * 3150 0 0 F 113 * * * * 348 * * 4311 * * * * * * * * * 3788 * 3445 113 0 * * * * * * 3150 0 0 G 114 * * * * * 0 * * * * * * * * * * * * * * 114 0 * * * * * * 3150 0 0 N 115 * * * * * * * * * * * 372 * * * 2506 4284 * * * 115 0 * * * * * * 3150 0 0 R 116 * * * * * * * * 1615 * * * * * 570 * * * * * 116 0 * * * * * * 3150 0 0 R 117 * * * 4259 3445 * * * 3063 4020 * 3026 * * 2166 3298 * * 3500 2846 117 0 * * * * * * 3150 0 0 I 118 * 4158 * * 4046 * * 1727 * 1796 2564 * * * * * 4020 3996 * * 118 0 * * * * * * 3150 0 0 L 119 * * * * 3916 * * * * 182 4259 * * * * * * * * * 119 0 * * * * * * 3150 0 0 R 120 4158 * * 3916 * * * 4259 3021 4227 * * * * 768 * * * * 4020 120 0 * * * * * * 3150 0 0 W 121 2815 * * * * * * * * * * * * * * 3788 * 3346 647 4360 121 0 * * * * * * 3150 0 0 E 122 * * * 0 * * * * * * * * * * * * * * * * 122 0 * * * * * * 3150 0 0 S 123 1762 * * * * * * * * * * * * * * 943 2435 * * * 123 0 * * 0 * * * 2716 0 0 //