HHsearch 1.5 NAME d2qqsa2 FAM FILE d2qqsa2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2qqsa2.a3m DATE Mon Mar 8 19:33:37 2010 LENG 50 match states, 50 columns in multiple alignment FILT 18 out of 22 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.2 EVD 0.3927 -0.3879 SEQ >ss_dssp CCCTTCEEEEECTTSCEEEEECCCCCCCCCEEEECTTSCEEEECSSSSCC >sa_dssp EDEEDDECEDEEEDDEEDEDECEDEEEDEDDECEDEEDDDEECDEDDCEE >ss_pred CCCCCCEEEEECCCCEEEEEEEEEEEEEEEEEEEEECCCEEEEEHHHCCC >ss_conf 98888689999267706404893122257999998077676662765159 >Consensus PPxxGexVxVxwtDGxlyxAxfxxxxxxxxYqVeFeDgSqxxvKRediyt >d2qqsa2 PPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYT >UniRef50_B7PUD4(853-901:952) Jumonji domain-containing protein, putative n=1 Tax=Ixodes scapularis RepID=B7PUD4_IXOSC E=2e-05 s/c=1.03 id=44% cov=100% PPSPGELVSVRWTDGKLYQSIFKSCTSTTLYTVVFEDESERNSKREAIY- >UniRef50_O94953(976-1025:1096) Lysine-specific demethylase 4B n=47 Tax=Euteleostomi RepID=KDM4B_HUMAN E=4e-18 s/c=1.85 id=63% cov=102% PPSEGELVELRWTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFT >UniRef50_D2XMU3(325-374:475) Jumonji domain containing 2c (Fragment) n=1 Tax=Saccoglossus kowalevskii RepID=D2XMU3_SACKO E=1e-15 s/c=1.69 id=47% cov=102% PPPEGSEVAVKWTDGVTYRATFKGYHTVTLYHAVFEDGSLVTLKRELLYT >UniRef50_UPI0000E46F9E(975-1022:1223) PREDICTED: similar to GASC-1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E46F9E E=1e-14 s/c=1.68 id=45% cov=98% -PEVGSDVEVRWVDALLYPGTFINSYSTKMYEVLFEDGSVITVKKEDIY- >UniRef50_Q1LUQ0(963-1012:1134) Jumonji domain containing 2B n=1 Tax=Danio rerio RepID=Q1LUQ0_DANRE E=1e-13 s/c=1.55 id=41% cov=102% PPELGELVVVKTVDGRVLNASYIKEHVHRYYQVEFQDETQLLLKRSEIHS >UniRef50_Q4SFG0(939-987:1156) Chromosome 1 SCAF14603, whole genome shotgun sequence. (Fragment) n=8 Tax=Euteleostomi RepID=Q4SFG0_TETNG E=5e-07 s/c=1.13 id=44% cov=100% PPDSGELIVVAMPNGQVANASFVRSHTNIYYQVEFQNQSQQMVKPSELH- >UniRef50_A2RRT0(1367-1416:1482) Zgc:153957 protein n=4 Tax=Euteleostomi RepID=A2RRT0_DANRE E=1e-17 s/c=1.82 id=61% cov=102% PPEVGETVQVKWPDGLLYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYT >UniRef50_UPI000180D11E(915-963:1001) PREDICTED: similar to jumonji domain containing 2A n=1 Tax=Ciona intestinalis RepID=UPI000180D11E E=3e-11 s/c=1.42 id=40% cov=100% -PKVGNTVHVKWTDGDIYEAEYRGHSDIQNITVTLDDGTSHEVERADVFT >UniRef50_A7SMJ1(482-529:579) Predicted protein n=2 Tax=Nematostella vectensis RepID=A7SMJ1_NEMVE E=8e-10 s/c=1.35 id=44% cov=96% --AEGTMVLVNWKEGEaLYRARVNSRRICVTYQIRFEDESCLGVRREDVY- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2612 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 3033 0 0 A 3 2181 * 3353 2044 * * * * 3195 4657 * * 3242 * * 2438 * * * * 3 0 * * * * * * 3190 0 0 E 4 5190 * * 1416 * * * * 4660 4075 3721 * 3830 4701 * 3353 * 2208 * * 4 0 * * * * * * 3190 0 0 G 5 * * * * * 0 * * * * * * * * * * * * * * 5 0 * * * * * * 3190 0 0 E 6 * * 4660 771 * * * * * * * 3195 * * * 2816 3020 * * * 6 0 * * * * * * 3190 0 0 V 7 * * 3742 3894 * * * 4660 * 1498 3580 * 4657 * * * 2819 2327 * * 7 0 * * * * * * 3190 0 0 V 8 * * * * * * * 2920 * * 3721 * * * * * * 336 * * 8 0 * * * * * * 3190 0 0 Q 9 3894 * * 2994 * * 3195 * * 2649 * * * 1882 * 3830 4657 2669 * * 9 0 * * * * * * 3190 0 0 V 10 * * * * * * * * * 4299 * * * * * * * 75 * * 10 0 * * * * * * 3190 0 0 R 11 3353 * * * * * 3721 * 1579 * * 3580 * 4792 1427 * * * * * 11 0 * * * * * * 3190 0 0 W 12 * * * * * * * * * * 3353 * * * * * 2887 * 383 * 12 0 * * * * * * 3190 0 0 T 13 * * * * * * * * 3580 * 3721 * 2346 * * * 972 2899 * * 13 0 * * * * * * 3190 0 0 D 14 * * 429 2649 * * * * * * * 3353 * * * * * * * * 14 0 * * * * * * 3190 0 0 G 15 3742 * * * * 112 * * * * * * * * * * * * * * 15 0 * * * * * * 3190 0 0 Q 16 * * 3195 3580 * * * 4657 2235 2007 * 4299 * 2955 4075 * * 3894 * * 16 126 3580 * 0 * * * 3190 1000 0 V 17 3721 * * * * * * 2436 * 1259 * * * * * * 3894 1977 * * 17 0 * * * * * * 3190 0 0 Y 18 3353 * * * * * * * * 2887 * * * * * * * * * 383 18 0 * * * * * * 3190 0 0 G 19 * * * 3195 * 1882 * * 4299 * * 1875 3742 3830 2728 * * * * * 19 0 * * * * * * 3190 0 0 A 20 226 * * * * 3742 * * * * * * * * * 3830 * * * * 20 0 * * * * * * 3190 0 0 K 21 * * * 3195 * * * 3830 1634 * * * * * 3580 2101 2816 4657 * * 21 0 * * * * * * 3190 0 0 F 22 * * * * 803 * * * * * * * * * * * * 3580 * 1543 22 0 * * * * * * 3190 0 0 V 23 * * * * 4962 * * 2435 2862 3905 * 3580 * * 3195 * * 1374 * * 23 0 * * * * * * 3190 0 0 A 24 3368 * * * * 1667 * * 2887 * * 3742 * * 3353 2054 4660 * * * 24 0 * * * * * * 3190 0 0 S 25 4701 3830 3159 4075 * * 3195 * * * * * * * 3580 1251 * * * 3226 25 0 * * * * * * 3190 0 0 H 26 * * * * * * 1203 * * * * 3339 * * 3034 2748 3830 4299 * 3742 26 0 * * * * * * 3190 0 0 P 27 4701 * 3195 * * * * 2385 * * * * 5009 * * 2785 1664 2562 * * 27 0 * * * * * * 3190 0 0 I 28 3915 3580 * * * * 2887 2039 * * * 3353 * * * 3585 2785 2782 * * 28 0 * * * * * * 3190 0 0 Q 29 * * * * * * 3043 3353 2731 * * * 3724 2577 4075 * 2496 3580 * 3905 29 0 * * * * * * 3190 0 0 M 30 * * * * * * 3721 4299 * 2862 1374 3195 * * * * 3580 * * 2669 30 0 * * * * * * 3190 0 0 Y 31 * * * * * * * 3195 * * * * * * * * * * * 167 31 0 * * * * * * 3190 0 0 Q 32 * * * 3742 * * 3894 * * 3680 * * * 736 * * 2478 * * * 32 0 * * * * * * 3190 0 0 V 33 3894 * * * * * * 3580 * * * * * * * * * 236 * * 33 0 * * * * * * 3190 0 0 E 34 * * * 749 * * * * * 3742 * * * * 3580 * 3195 2862 * * 34 0 * * * * * * 3190 0 0 F 35 * * * * 167 * * * * 3195 * * * * * * * * * * 35 0 * * * * * * 3190 0 0 E 36 * * 3195 604 * * * * * * * * * 2101 * * * * * * 36 0 * * * * * * 3190 0 0 D 37 * * 149 * * * * * * * * 3353 * * * * * * * * 37 0 * * * * * * 3190 0 0 G 38 * * 4792 1790 * 794 * * * * * * * 3353 * * * * * * 38 0 * * * * * * 3190 0 0 S 39 * * * * * * * * * * * * * * * 266 2569 * * * 39 0 * * * * * * 3190 0 0 Q 40 * 3580 * 3830 * * * * * 3894 * * * 749 * 3195 * 3742 * * 40 0 * * * * * * 3190 0 0 L 41 * * * * * * 3195 2469 * 1177 * * * 3353 3830 * * 3325 * * 41 0 * * * * * * 3190 0 0 V 42 3915 * * 3195 * 3171 * * * 2576 3353 3830 * * * 4660 1704 5009 * * 42 0 * * * * * * 3190 0 0 V 43 3817 * * * * * * * * 2304 3915 * * * * 3830 * 761 * * 43 0 * * * * * * 3190 0 0 K 44 * * * 3195 * * * * 309 * * * * * 3580 * * * * * 44 0 * * * * * * 3190 0 0 R 45 * * * * * * * * 3742 * * * 3353 3721 412 * * * * * 45 0 * * * * * * 3190 0 0 D 46 3195 * 3847 896 * 4299 * * * * * * * * * 2669 3721 * * * 46 0 * * * * * * 3190 0 0 D 47 3830 * 668 2101 * * * * * 3894 * * * * * * * * * * 47 0 * * * * * * 3190 0 0 V 48 * * * * * * * 1091 * 2598 * * * * * * * 1452 * * 48 0 * * * * * * 3190 0 0 Y 49 * * * * 2350 * 2101 * * * * * * * * * * * * 809 49 0 * * * * * * 3190 0 0 T 50 * * * * * * * * * * * * * * * 1564 596 * * * 50 0 * * 0 * * * 2577 0 0 //