HHsearch 1.5 NAME d2qj2a2 FAM FILE d2qj2a2 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2qj2a2.a3m DATE Mon Mar 8 22:20:52 2010 LENG 83 match states, 83 columns in multiple alignment FILT 105 out of 491 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.4 EVD 0.4787 1.2990 SEQ >ss_dssp CCBSSSCTTCCCCCCBBTTCCBBCCTTCCSSCCCCCCGGGGTTSCCCTTCCBCSSCCTTCSEEEBSSTTCCEEEBCCCBTTCC >sa_dssp EDBEEDBEEBECEDCDBEEECEAADAECDEDBEBEBDDEECEECCBDECCAABBDBDEEBABABADDEEDDECDBEBDCDEEE >ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCC >ss_conf 96537867633431061788503366776741001323556767766141778888747734893589842355678545759 >Consensus dCyxgxGxxYrGxxxxTxxGxxCxxWxsxxxxxxxxxxxxxxxxxlxhNyCRNPxxxxxxPWCYxxxxxxxxexCxIxxCxdx >d2qj2a2 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQCSEV >UniRef50_Q04756(286-370:655) Hepatocyte growth factor activator long chain n=15 Tax=Amniota RepID=HGFA_HUMAN E=2e-17 s/c=1.06 id=30% cov=99% -CFLGNGTGYRGVASTSASGLSCLAWNSDLLYQELHVDSVGAAALLGlgpHAYCRNPDNDE-RPWCYvVKDSALSWEYCRLEACESL >UniRef50_C3Z668(199-285:417) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z668_BRAFL E=2e-05 s/c=0.58 id=29% cov=95% --YVDGTTSYRGQVNVTGTGQQCLDWADEMVQRSlgymGLSEAQIAAAGLDGNYCRDPTGS-GTLECFVAPGGGLFgivlqEACRIDECS-- >UniRef50_D2WL87(408-460:579) MAC/perforin-and kringle-domains-containing protein (Fragment) n=1 Tax=Pomatoceros lamarckii RepID=D2WL87_9ANNE E=1e-09 s/c=1.21 id=30% cov=65% --------------------------DSQYSGDLDRTREGYKCAGGTK--CRNSDGKSYGPFCVTSDPSVKWGYCNVPSCD-- >UniRef50_UPI0000DB7C17(513-599:1328) PREDICTED: similar to Hepatocyte growth factor-like protein precursor (Macrophage stimulatory protein) (MSP) n=1 Tax=Apis mellifera RepID=UPI0000DB7C17 E=2e-08 s/c=0.69 id=27% cov=98% NCLSDlRDYDYRGTQWTSINEIPCIPWISKDIPSEMKNDKKFidGSALKALNKCRNPTHDPKGPYCYAYTPweseTIKKRHCKIRKC--- >UniRef50_P91823(233-315:634) Protein T22A3.6, partially confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=P91823_CAEEL E=5e-08 s/c=0.71 id=29% cov=90% -CSKGSMDWYRGKKNVDFKDRPCLFWSSipnstfdISDSSSSSYSMNRILPDEYENFCRNPDKNPLGPWCYVGNDTTApcFQPC-------- >UniRef50_A7RKI4(172-278:1071) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RKI4_NEMVE E=6e-14 s/c=0.73 id=29% cov=100% DCYHGKGLEYRGTQSRALKGNTCKYWHMSggaHPNSHKLARVMGFYSKGGHDYCRNFPFNPtcylknndvkscqsnilSQPWCYSDTNPAeeteyKIHYC NVKQCSD- >UniRef50_C3Y408(534-616:1185) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Y408_BRAFL E=1e-12 s/c=0.89 id=30% cov=95% -CYTVTGADYRGNQSQPRpGGKPCVSWTDrgtyNNKGVHAHNQEHRNRGIGEHNYCRNPS-TYFSPWCYTGSGETEYRPCLILDC--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * 684 * * * 4646 * * * * 1566 * * * * * * * * 1 0 * * * * * * 5108 0 0 C 2 * 0 * * * * * * * * * * * * * * * * * * 2 25 5840 * 0 * * * 6080 1000 0 I 3 5797 * * 6383 2761 * * 4027 * 5189 4459 * * 6349 6459 6276 * 3178 * 886 3 21 6088 * 1000 1000 * * 6174 1000 0 I 4 5928 * 4894 4468 5585 5736 3932 7007 3798 3886 5543 3587 6777 * 5642 2951 2550 3123 4485 4084 4 29 5665 * 1000 1000 * * 6226 1499 0 G 5 5027 * 2411 3413 * 1083 5358 6369 6819 * * 3862 5016 6427 6850 4824 * 6085 * * 5 52 4811 * 346 2230 * * 6421 2035 0 K 6 4783 * 3067 5881 * 4821 * 5758 2883 6608 * 1802 5624 6557 2969 4151 3303 6086 * 6654 6 25 5862 * 553 1652 * * 6433 1479 0 G 7 6769 * 5359 6277 * 188 * * * * 5398 6016 6266 * * 6866 6040 * * * 7 28 5701 * 454 1890 * * 6438 1530 0 R 8 3317 * 4249 2572 * 5901 4032 4593 5120 3976 5620 5990 * 3135 3736 3201 3919 4459 * 5508 8 14 6711 * 0 * * * 6499 1000 0 S 9 5341 * 2291 3386 4223 4162 4577 * 5057 4027 6647 2976 * 6977 * 2800 3434 * 6585 4606 9 0 * * * * * * 6447 0 0 Y 10 * * * * 5573 * 5907 * * * * * * * * * * * * 55 10 0 * * * * * * 6453 0 0 K 11 5002 * * 5604 6846 5479 5323 5687 6111 4307 5795 5139 * 5201 660 4426 6865 5881 * 5093 11 0 * * * * * * 6453 0 0 G 12 6268 * * 6367 * 37 * * * * * * * * * * * * * * 12 0 * * * * * * 6453 0 0 T 13 6080 5149 3911 6715 4831 * 5824 4535 3228 5030 5770 4007 5218 4385 4199 4160 1649 4454 * 5819 13 0 * * * * * * 6453 0 0 V 14 3598 * * 4762 * 5109 6870 3209 3637 3673 4663 6683 * 2652 5278 4907 4047 2236 4800 * 14 13 * 6787 * * * * 6454 0 0 S 15 3441 * 3726 * 4858 * 5023 * 5830 * * 1983 6269 5751 4020 1489 4933 * 6138 * 15 0 * * * * * 0 6450 0 1000 I 16 6675 * * 4989 4780 * 3861 4598 3347 5643 5094 6473 * 4541 3820 4582 2183 2082 6161 5188 16 24 6787 7098 0 * * 0 6450 1000 1000 T 17 3228 * 4734 * * 6480 * 6402 * * * * 4361 * * 2578 698 * * * 17 0 * * * * 946 1056 6454 0 1550 K 18 3319 * 4693 2661 5211 4846 6966 3433 3796 4674 5355 * * 4192 2850 3685 4044 3770 * * 18 26 5800 * 0 * 0 * 6450 1550 1000 S 19 5588 * 2941 5398 7141 3941 5412 * 3619 6111 6793 3738 4795 5250 4705 1473 3675 * * 6574 19 0 * * * * * * 6454 0 0 G 20 * * 4478 5443 * 237 * * 6072 * * 5591 6444 7041 5662 6736 * * * * 20 16 6530 * 2000 415 * * 6469 1000 0 I 21 3594 * 7212 3899 4778 * 4729 4286 3035 2677 * 4448 6775 3266 3051 4851 4900 5312 6392 4188 21 37 6444 6168 2807 222 * * 6469 1000 0 K 22 3784 * 5908 3500 6880 4988 6051 5866 3483 5279 5786 6555 2476 4096 3839 3180 2693 5562 6384 * 22 0 * * * * 0 * 6442 0 1000 C 23 * 0 * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 6469 0 0 Q 24 5162 * * 5840 6491 6392 * 4601 3618 1314 4126 6378 * 2229 6822 4848 5063 4944 * 5775 24 0 * * * * * * 6469 0 0 P 25 3834 * 4938 4068 4943 * 5887 * 4378 4422 4805 2525 2696 4446 2995 4017 6648 * 6737 3694 25 0 * * * * * * 6469 0 0 W 26 * * * * * * * * * * * * * * 5598 * * * 30 * 26 83 6807 4405 1585 585 * * 6469 1000 0 S 27 4427 * 2646 6534 5463 * 4940 6099 6397 5082 5472 1692 5234 5777 7250 2431 3279 * * * 27 93 6613 4258 2585 263 * 0 6421 1000 2120 S 28 3757 * 2973 4635 * 6601 3962 6429 5563 * 6193 5385 * 4072 5256 1346 3786 4006 * * 28 101 4383 5658 2298 328 2681 245 6370 2791 3325 M 29 4292 * 3106 4132 6698 5634 5213 4251 4393 4315 7229 5174 3428 2476 6622 3689 3173 4399 * 5996 29 116 6179 3980 1585 585 * 0 6365 1000 3451 I 30 4376 * 4638 3971 4233 6283 4477 3839 3972 3441 4096 4870 5000 5521 4863 3299 3118 4399 6599 4140 30 77 * 4263 * * 2440 294 6488 0 4221 P 31 4022 * 4584 5291 6309 4375 6609 2748 6173 2965 * 5276 1984 * 6583 5562 4253 3168 * 4814 31 34 6493 6348 1000 1000 2710 239 6525 1000 4303 H 32 5594 * 3477 6523 5920 5451 2921 4544 5465 3058 6358 2997 5014 3926 4154 4125 5751 3269 * 4275 32 0 * * * * 1761 504 6527 0 4297 E 33 3410 * 4302 3761 3980 5191 6574 5695 2771 4601 4939 4386 5122 3210 4406 2708 5980 5782 * 5520 33 82 5735 4779 1824 479 1016 984 6366 1469 3902 H 34 6637 * * 3965 3588 * 2057 4867 3686 4788 6585 3641 5246 4218 3510 3734 * 4630 * 3639 34 62 4842 7139 1247 789 1539 608 6371 1730 3605 S 35 4780 5292 3898 3951 4374 3583 * 4479 4596 3624 5333 3505 4161 4683 4002 2736 5144 4670 * 5675 35 32 6717 6330 1585 585 2682 244 6398 1000 2985 F 36 5122 * 4765 4165 3333 4768 4556 6575 4635 3892 7047 4117 * 4653 5201 4181 4414 3233 6653 2109 36 57 5654 5708 2113 379 2613 258 6386 1560 2935 L 37 4968 * 4787 5749 4784 5207 4850 4477 4657 3181 4758 3363 3763 5941 5016 3067 2668 5846 6701 4019 37 15 6614 * 1585 585 2825 220 6339 1000 3174 P 38 3475 * 3799 3942 5236 5011 6067 5304 3524 4103 5091 4590 2517 4194 4867 4346 3826 4402 * 5118 38 11 6990 * 0 * 2584 263 6333 1000 3096 S 39 3249 * 3522 3984 3672 5416 5159 4817 4191 4926 5764 3581 4902 4322 4475 3144 4467 4933 6704 4047 39 38 6092 6461 0 * * 0 6353 1000 2910 S 40 3755 6854 4588 3667 5785 4728 4931 * 3418 3724 5523 3265 3681 6003 3964 2799 4324 4527 * 5744 40 92 4798 5268 2856 214 2645 251 6337 1508 2966 Y 41 3986 * 4894 4203 2957 4670 4521 4298 * 3373 * 5241 3891 5274 4664 3887 5938 6039 5255 2282 41 54 5129 6919 1000 1000 2855 215 6339 1637 3561 R 42 4620 * 3430 5333 6106 4536 5353 5118 4036 6814 * 5057 1954 5584 2846 4522 3298 5389 5796 5275 42 55 5187 6645 400 2047 2108 381 6373 2035 3572 G 43 3200 6554 3095 3357 5265 3209 4870 * * 4247 * 4640 5993 3962 5878 2980 * 5098 4101 3415 43 115 5147 4366 1000 1000 2534 273 6403 2130 3391 K 44 2792 * 3881 4248 5786 2495 5230 4741 3923 3711 5978 5716 3812 5369 5814 4044 6385 3803 * 4609 44 51 5615 6099 3748 112 3392 144 6348 1634 3867 D 45 4836 6871 2991 4511 * 2009 6658 3994 4514 3065 * 3933 5786 5783 4231 3162 5660 5970 * * 45 170 4054 4299 335 2270 1910 446 6340 2921 3962 L 46 5422 * 5085 4573 6776 1956 6689 4444 4976 1200 4968 6357 5677 * * * 5187 5349 * * 46 38 5271 * 1119 890 805 1226 6325 1808 4055 Q 47 4114 * 2388 3498 * 3100 6903 * 3802 5597 6762 3220 4708 4561 4692 4134 4336 3618 6493 6580 47 151 3331 * 1147 867 549 1660 6415 3933 3008 E 48 * * 4706 2651 * 4003 1010 * 4799 4364 * 5223 * * 4391 4313 5283 * * 6876 48 25 * 5837 * * 937 1066 6455 0 1527 N 49 5928 * 6197 * * * * * 5518 * * 299 5228 * 4847 3761 * * * * 49 0 * * * * 1696 532 6449 0 2091 Y 50 5301 * * * 2035 * 5911 * 4865 * * * * * 4538 * * * 6558 676 50 13 6796 * 1000 1000 0 * 6467 1000 1644 C 51 * 37 * * * * * * * 5307 * * * * * * * * * * 51 0 * * * * * * 6475 0 0 R 52 6170 * * * * * * * * * * 5307 * * 58 * * * * * 52 22 6044 * 1585 585 * * 6475 1000 0 N 53 6368 * 4842 * * * * * * * 6376 208 * 6044 * 4061 * * * * 53 30 * 5621 * * * * 6475 0 0 P 54 5087 * 5395 * 4883 6678 * * * 3928 * * 333 * * 6795 6181 6841 * 6355 54 30 6903 6361 0 * 0 * 6455 1000 1452 R 55 5676 * 1547 4081 6032 2407 6797 5786 5300 5833 * 3488 5150 * 5155 3969 3545 * 6570 * 55 97 7203 4102 0 * 0 * 6447 1000 1000 G 56 4360 * 4748 5480 5477 1176 4943 * 4820 3862 * 3585 3910 5462 3924 4536 6904 * * * 56 146 5770 3676 0 * 283 2487 6446 1472 2888 E 57 5722 * 1702 3828 * 4477 * * 3669 5629 5103 3344 6844 5841 4377 3295 3590 4380 7225 5791 57 158 4635 3980 604 1548 0 * 6427 2278 3578 E 58 3494 * 3859 2746 4805 6670 6576 5329 3871 4301 5779 5077 2855 * 2565 3851 * 5000 6934 5084 58 184 4505 3729 2715 238 0 * 6452 2479 2861 G 59 4200 * 5149 5001 6316 3304 5157 5263 5369 3808 4813 4323 4212 4701 3900 2436 3083 4442 * 5108 59 123 5196 4197 1242 792 0 * 6495 2067 3043 G 60 5151 * * 4958 6367 1653 5222 * 3091 * * * * 3495 1982 4934 3971 6273 6131 * 60 37 5292 * 3700 115 0 * 6463 1000 2829 P 61 4345 6031 * * * * * 4745 * 4285 * * 256 * * * * 6742 * * 61 0 * * * * * * 6474 0 0 W 62 * * * 6103 3971 4538 * * * * * * * * * 5307 * 6023 335 4474 62 0 * * * * * * 6474 0 0 C 63 * 25 * * * * * * * * * * * * 5837 * * * * * 63 11 7088 * 0 * * * 6474 1000 0 F 64 * * * * 1916 * 6756 5443 * 5091 * * * * * * * 5923 * 606 64 85 4578 6023 848 1170 * * 6474 2527 0 T 65 4811 * * * * * * 3769 6071 * * 5287 6180 * 6598 5122 1396 1388 * 4810 65 144 4455 4349 799 1234 * 0 6437 2518 1000 S 66 3341 * 3448 4065 * 4099 6785 6403 3422 5545 4860 3722 * 3777 4179 2723 2988 5885 * 5433 66 79 5055 5429 943 1059 540 1679 6376 2005 3050 N 67 5029 * 2202 3669 * 3359 4529 6904 4150 5128 * 2630 6025 5408 5550 3354 3418 6756 * 5876 67 56 5576 5888 1000 1000 2082 389 6416 1489 2275 P 68 5690 * 4478 3529 6155 2460 6740 * 5238 5562 * 4052 2061 5052 4101 2927 4475 4986 * * 68 106 4093 6388 1250 787 0 * 6435 2883 2634 E 69 3724 * 4453 4110 5529 3376 6798 4793 3866 5229 * 3254 3333 4565 3725 3879 3327 4252 * 5608 69 61 5231 6061 919 1086 * 0 6465 1995 1000 V 70 4144 6789 4852 6712 4707 3411 4780 3576 4556 2694 6335 4214 * 4754 4850 3990 3337 3023 7100 6585 70 111 5551 4245 2322 322 1538 609 6465 1539 1905 R 71 3995 * 6685 3786 6558 4270 * 3845 3110 4880 4797 * 4035 3254 2860 3455 5080 4282 * 4023 71 131 4410 4646 1244 791 1023 978 6389 2690 2886 Y 72 6659 * 6383 4448 3052 * 6470 5416 3595 4350 5795 * 4230 6678 4352 5063 5118 * 1392 3729 72 80 4213 * 1319 739 0 * 6348 2649 3093 E 73 6477 * 2674 1128 * 4568 4898 * 4558 * 6888 * * 2518 5236 4846 6396 * * * 73 13 6769 * 0 * * * 6474 1000 0 V 74 3915 * 6834 4038 2904 * 4279 6348 5317 5089 * 6491 4923 6579 5113 4768 4930 4173 6742 1342 74 54 6444 5317 3322 152 * * 6474 1000 0 C 75 * 0 * * * * * * * * * * * * * * * * * * 75 0 * * * * * 0 6453 0 1087 D 76 3712 5905 1517 4430 * 3592 * * 4534 4298 5742 2129 5233 * 5459 5145 * 6738 * * 76 52 4825 * 0 * * 0 6422 1831 1087 I 77 5584 * * * * * * 993 * 3954 * 5895 * * * * 6530 1379 * * 77 23 6690 7291 2000 415 0 * 6407 1000 1087 P 78 5694 * 5390 3855 * * 5782 5791 4128 6877 7057 5255 1152 4384 3273 3439 4409 6437 * * 78 31 5548 * 0 * * 0 6410 1000 1000 Q 79 4242 * 3775 4972 5455 6332 4829 4470 2480 4436 5356 5941 3474 3529 3742 3328 4680 4256 * 5774 79 0 * * * * 0 * 6410 0 1000 C 80 * 0 * * * * * * * * * * * * * * * * * * 80 0 * * * * * * 6401 0 0 S 81 4087 * 3024 2958 * 4111 * * * * * 2790 4087 5258 6308 2396 2958 4599 * 5086 81 0 * * * * * * 6320 0 0 E 82 * * 1017 1957 5357 4980 * * 5372 * * * * 4035 * 5523 4337 * * 4806 82 0 * * * * * * 5376 0 0 V 83 * * * * * * * 3382 * 1315 * * * * * * * 993 * * 83 0 * * 0 * * * 3775 0 0 //