HHsearch 1.5 NAME d2peqa1 FAM FILE d2peqa1 COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d2peqa1.a3m DATE Tue Mar 9 01:02:35 2010 LENG 108 match states, 108 columns in multiple alignment FILT 32 out of 36 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4175 -0.6781 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSCTTSHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHH HHHHHHHC >sa_dssp EEECDDEEEDEECDCDBADCABDDACDDADEEDDDCBECADDACEDCECEEBEEABECADEDCEEABEDADDCCEECCEDDDDECEEDDEDEDEEDDDEE EEDEEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHCC >ss_conf 9547999999999999999999999999953083444899999852894759999999972059999999999999987689999999999999969999 99998419 >Consensus xxxxxxkxaaxxLxxxfTyxAvriVlxQlxxxnpxxxxxLxdFlxxnplxDGdxxLxxLmxexxxlAlRilxvRxxxaexxfdxlxxxxxxxixxxNxxx xRxxLxrx >d2peqa1 EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNH RRSLLERL >UniRef50_C1MVZ1(16-115:115) Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVZ1_9CHLO E=0.0005 s/c=0.45 id=22% cov=92% ------KKASRLLTALFTYVATWIGTREAARVTNVHAFLL-DFLEANPVKDGDAFLEKLTAADPSIARRVMDVRTAYAGGDFewDICRGLVMQNMEKSNA EIQRGFL--- >UniRef50_A4RX50(13-89:150) Predicted protein n=2 Tax=Ostreococcus RepID=A4RX50_OSTLU E=0.0003 s/c=0.60 id=25% cov=63% -------DVDSLLMNYFTFRALKETLAQMQETDlspgKGEYKWLYNFAASEYKNRGDEFIKKLFAEgRSDHAQRILAQR--------------------- ------------- >UniRef50_Q7EZV3(73-176:186) Os08g0425200 protein n=10 Tax=Spermatophyta RepID=Q7EZV3_ORYSJ E=6e-24 s/c=1.07 id=26% cov=93% ------KKAARNLQHFFNYIAVRVVLTQLESYNREAYGELMDFVNRNSLNDADTFCKKLIRESPrhkQLAMRILEVRSAYVKHDFEWdnLKRLSFKMVDE ANTKLMRDYV--- >UniRef50_A4S6B8(15-137:144) Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S6B8_OSTLU E=2e-21 s/c=0.84 id=23% cov=94% ------RRASELMNAMLTYVSAWIVISQLENVAPRRsvagedagedgegearrvttsHEFLLDYLEANPVRDGEQWLIALTRVNPTLAERIMAVRRAYAE EDFEWhnVAKLTSESIAAGNERAMREWLK-- >UniRef50_C1E300(25-139:186) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E300_9CHLO E=4e-16 s/c=0.75 id=21% cov=89% ---------AQMLRMLMTHVAIRVVQGHLEGLGNDGGFapqasnfdgscgspDLADLLwamENVPLGDGDSWISAFMKKNPVVALRVLEARKAYCEEfDY QQMRSATRELIDSGNMSLMREH---- >UniRef50_D1H5B9(51-151:167) Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1H5B9_VITVI E=8e-19 s/c=0.94 id=31% cov=67% ------EDVKTQILNYFTYKAVRTVMHQLYEMNPTQYRWLYDFVAANKPGEGKRFIRILVKEKQELAERVMVTRLHL----------------------- -------- >UniRef50_A4S2Z1(9-116:116) Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S2Z1_OSTLU E=2e-15 s/c=0.77 id=26% cov=70% ---------SEALKTLFTVAAVRTTLDQELSYDNEGGSTalssaLAGFLETHPLRNGDEWLEALMRDEPQLrlaALRLMETRAAYARENFDW-------- ---------------- >UniRef50_C1E4V2(69-222:250) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E4V2_9CHLO E=1e-13 s/c=0.50 id=21% cov=94% ------RKAATALGNLFTMAATRVILDQFTGTrhRSPVYYKMvravrgpdvapppptpraplapdleprknpvlpaapltffslatqVDFLSENPLRNGN EWLAKLMREPdndlRITAMRIIETRRVFAESEFNWevMNRVAKEEIDDDTLEMNKQMLMR- >UniRef50_A4RTZ0(17-126:130) Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTZ0_OSTLU E=8e-11 s/c=0.62 id=27% cov=65% ---------------------------------------LKAYVDAHPIgRDGNDWLRGLMARDdagsRAAGLRVLEARETYANEVFSFeeVREMVEKAV TEENDKLMADYVKRM # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 693 1391 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1968 0 0 F 2 * * * * 2679 * * 2484 * 1885 2150 * * 2563 * * * * * * 2 0 * * * * * * 1968 0 0 K 3 * * * * * * * * 285 * * * 2481 * * * * * * * 3 0 * * * * * * 2060 0 0 K 4 * * * * * * 2706 * 2301 * * * * 1574 1699 * * * * * 4 0 * * * * * * 2060 0 0 V 5 * * * * * * * 675 * * * * * * * * * 1420 * * 5 0 * * * * * * 2060 0 0 A 6 285 * * * * * * * * * * * * * * 2481 * * * * 6 0 * * * * * * 2060 0 0 K 7 * * * 3075 * * * * 1277 * * * * 4059 1433 * 4712 * * * 7 0 * * * * * * 3575 0 0 E 8 4221 * 1421 3313 * * * * 1444 * * * * * 3253 * * * * * 8 0 * * * * * * 3779 0 0 T 9 1082 * * * * * * * * * * * * * * * 1660 2243 * * 9 0 * * * * * * 3779 0 0 A 10 852 * 3947 4646 * * * * 3756 * * * * * * 2148 * 4592 * * 10 0 * * * * * * 4006 0 0 I 11 * * * 2945 * * * 4741 1879 * 4389 * * 3313 2776 3335 3048 4429 * * 11 0 * * * * * * 4006 0 0 T 12 2212 * * * * 4584 3645 * * 2655 2304 4328 * 3756 * * 3746 3281 * * 12 0 * * * * * * 4006 0 0 L 13 * * * * * 4724 * 4962 * 235 3634 * * * * * * * * * 13 0 * * * * * * 3978 0 0 Q 14 3695 * * 4510 * 3931 3617 3450 3831 3432 4124 3626 * 2800 3240 * 4315 4668 * * 14 0 * * * * * * 3978 0 0 S 15 2929 * 3228 * * * 4535 * * * 3966 1726 * * * 1678 4639 * * * 15 0 * * * * * * 3978 0 0 Y 16 * * * * 3004 * * * * 1594 3001 * * * * * * 4911 * 1374 16 0 * * * * * * 3978 0 0 L 17 * * * * 825 * * 4521 * 1603 3993 * * * * * * * * * 17 0 * * * * * * 3998 0 0 T 18 * * * * * * * * * * * 4550 * * * * 63 * * * 18 0 * * * * * * 3998 0 0 Y 19 * * * * 3377 * 3993 * * * 2722 * * * * * * 4672 * 621 19 0 * * * * * * 3998 0 0 Q 20 3311 * * * * * * 3542 3016 * * * * 2113 4164 4009 * 1553 * * 20 0 * * * * * * 3998 0 0 A 21 119 * * * * * * * * * * * * * * 3655 * * * * 21 0 * * * * * * 3998 0 0 V 22 2737 4535 * * * * * 3993 * 4018 5201 * * * * * 3168 878 * * 22 0 * * * * * * 3998 0 0 R 23 * 4695 * * * * * * 2349 4821 * * * * 843 * * * 2537 * 23 0 * * * * * * 3998 0 0 L 24 * * * 4164 * * * 1653 * 3992 * * * * 4821 * 2185 1698 * * 24 0 * * * * * * 3998 0 0 I 25 * * * * * 4330 * 2123 * * * * * * * * 3396 676 * * 25 0 * * * * * * 3998 0 0 S 26 4449 * * * * * * 2489 * 1338 4077 * * 3348 4695 3893 3522 5056 * * 26 0 * * * * * * 3998 0 0 Q 27 2447 * 1709 4626 * 3233 4997 * * * * 5177 * 4931 4330 3095 3245 * * * 27 0 * * * * * * 3998 0 0 Q 28 * * * 3555 * * 3993 * * * * * * 231 * * * * * * 28 0 * * * * * * 3998 0 0 L 29 4330 * * 3896 4022 * * * * 598 3085 * * * * * 4535 * * * 29 0 * * * * * * 3998 0 0 S 30 3104 * * 1697 * 4598 * * * 4672 * * * 3377 * 2776 4022 * 4742 2702 30 0 * * * * * * 3998 0 0 E 31 * * 4447 1289 * 1968 * * * * * 3026 * * 4329 3097 * * * * 31 60 4622 * 2807 222 * * 4000 1000 0 T 32 4533 * * * * * * * * 3991 3008 * * * * 4972 1407 2951 * 2111 32 191 3012 * 1000 1000 * * 4000 1674 0 N 33 3026 * 2718 * * 3991 * * * * * 1033 * * 3012 * 4329 * * * 33 85 4131 * 2000 415 * * 4000 1000 0 P 34 * * * * * * * * 3280 * * 2473 973 4622 4545 3012 * * * * 34 107 3810 * 4441 68 * * 4000 1539 0 G 35 4689 * 3991 2619 * 2663 * * * * * 3891 1831 4622 3652 * 4077 4329 * * 35 0 * * * * * * 4000 0 0 Q 36 2608 * * 3486 * 2826 4329 * * 5046 4004 * * 2392 3224 4929 5154 3253 * * 36 53 4798 * 4392 70 * * 4000 1000 0 A 37 1691 * * * * 2916 3659 * * * * * * * * 4519 * * * 1200 37 0 * * * * * * 4000 0 0 I 38 4956 * * 3659 3150 4545 * 2630 3554 3162 4850 * 4004 * 3959 4668 5168 4447 * 3316 38 162 3231 * 4148 84 * * 4000 1550 0 W 39 * * 2743 3689 3026 5154 * * 3012 4329 * * * * 4689 * 4668 * 1433 * 39 58 4668 * 2322 322 * * 4000 1000 0 L 40 * * * * 4092 * * * * 183 4052 * * * * * * * * * 40 119 5006 4377 5492 32 * * 4000 1000 0 G 41 3310 * * * * 4875 5575 3963 5379 3011 2927 4644 * 3387 4992 3475 * 3969 * 2477 41 0 * * * * 0 * 3920 0 1000 E 42 5411 * 1187 2534 * 4778 5683 * * * * 2428 * 3534 * * * 4778 * * 42 0 * * * * * * 4000 0 0 F 43 * * * * 507 * * * * 4090 * * * * * * * * * 2072 43 0 * * * * * * 4032 0 0 S 44 4149 * * * * * * * * 770 * * * * * 2475 * 2495 * * 44 87 4090 * 1585 585 * * 4032 1000 0 K 45 2067 * 4278 1722 * 4648 5153 * 4938 * * 3861 * 3713 * 2951 * 4980 * * 45 0 * * * * * * 4032 0 0 R 46 2652 * * 2643 * * 4439 * 4452 * * 3467 * 4433 3328 2917 2392 5068 * * 46 0 * * * * * * 4032 0 0 H 47 * * 5094 4149 4806 4922 2978 * 4082 * 4452 1092 4648 5211 * * * 3679 * * 47 0 * * * * * * 4032 0 0 P 48 * * * * * * * * 2390 * 4641 5130 909 * 5193 2988 * * * 4195 48 0 * * * * * * 3999 0 0 I 49 * * * * 4916 * * 2391 3401 1310 * * 2969 * * * * 2731 * * 49 51 4850 * 0 * * * 3999 1000 0 Q 50 * * * * * 2347 * * 3384 * * 2863 * 1969 2010 4941 4880 * * * 50 78 4255 * 890 1119 * * 3999 1364 0 E 51 5119 * 436 3949 * * * * * * * 3152 * * 4195 * * * * * 51 59 4641 * 0 * * * 3999 1000 0 S 52 3422 * * * * 264 * * * * * * * * * 3753 * * * * 52 42 5119 * 0 * * * 3999 1000 0 D 53 * * 1081 2116 * * * * 2969 * * 3158 * * * 4135 * * * * 53 35 * 5366 * * * * 3999 0 0 L 54 1808 * 5471 2241 5099 * * * 3300 3973 * * * 4965 4221 3401 3718 5076 * * 54 0 * * * * 0 * 4041 0 1000 Y 55 * * * * 1352 * * * * * * * * * * * * * 1253 2407 55 0 * * * * * * 3999 0 0 L 56 * 3971 * * * * * 2234 * 622 3756 * * * * * * * * * 56 0 * * * * * * 3999 0 0 E 57 1882 * 4807 2397 * * * 5311 3543 * * * * 4688 2153 4629 3505 * * * 57 0 * * * * * * 3999 0 0 A 58 1228 * * 2710 * 4085 * 5145 2337 4880 * * * 5016 * * 4941 4729 * * 58 0 * * * * * * 3999 0 0 M 59 * * * * 3715 * * * * 351 3329 * * * * * * 4641 * * 59 0 * * * * * * 3999 0 0 M 60 * * * * 3469 4880 * 4172 * 2947 1062 * * * * 4880 3572 3415 * * 60 0 * * * * * * 3999 0 0 L 61 2121 * 5099 * * 4807 * * 2120 4777 * 4916 * 3919 1559 * * * * * 61 0 * * * * * * 3999 0 0 E 62 3946 * 5250 981 * * 2893 * 3635 * * * * * 3349 * 4807 4233 * * 62 208 2897 * 1203 822 * * 3999 2030 0 N 63 * * 2980 3272 * * * * 2969 * * 1294 4231 * 3588 3355 * * * * 63 260 2598 * 2000 415 * * 3999 1951 0 K 64 * * * * * * 4641 * 3475 4275 * 5158 1835 2586 2148 3083 * * * * 64 46 5001 * 1585 585 * * 3999 1000 0 E 65 3272 * 2626 1368 * * * 5109 * 3782 * * * 4120 4941 4016 4233 4629 * * 65 48 4941 * 1585 585 * * 3999 1000 0 L 66 4085 * * * * * 4195 3946 * 866 4688 * * * * * 4342 2437 * * 66 81 4203 * 1585 585 * * 3999 1468 0 V 67 451 * * * * 2981 * * * * * * * * * * * 2821 * * 67 0 * * * * * * 3999 0 0 L 68 * * * 2467 4688 * * * * 1184 3033 * * 4195 5016 * * 3265 * 5130 68 0 * * * * * * 3999 0 0 R 69 * * * * * * * * * 4275 * * * * 76 * * * * * 69 0 * * * * * * 3999 0 0 I 70 * * * * * * * 1108 * 3005 4688 * * * 4275 * * 1639 * * 70 0 * * * * * * 3999 0 0 L 71 * 4807 * * * 5159 * 2855 * 1361 1290 * * * * * * * * * 71 0 * * * * * * 3999 0 0 T 72 2789 * 5016 1222 * * * 4880 * * * * * 4275 * * 2207 3415 * * 72 0 * * * * * * 3999 0 0 V 73 3735 4807 * * * * * * * * * * * 4195 * * 1900 819 * * 73 0 * * * * * * 3999 0 0 R 74 * * * * * * * * * * * * * * 0 * * * * * 74 0 * * * * * * 3999 0 0 E 75 3927 * 5317 1405 * * * * 2586 2870 * * * * 3320 3411 4866 * * * 75 0 * * * * * * 3846 0 0 N 76 1493 * 4564 * * * 1631 * * * * 4495 * * * * 3473 2785 * * 76 0 * * * * * * 3804 0 0 L 77 * * * * 3741 * * 3641 * 1323 * * * * * * * * * 1167 77 0 * * * * * * 3804 0 0 A 78 446 3222 * * * * * * * * 4334 * * * * * * 3196 * * 78 116 3696 * 2000 415 * * 3631 1180 0 E 79 4503 * 4479 915 * 3042 * * 4244 * * 3138 * 4149 4771 * * * * * 79 0 * * * * * * 3631 0 0 G 80 * * 4322 1251 3696 2980 3356 * * * * * * 4037 * 3490 3673 * * * 80 170 4014 4334 0 * * * 3631 1000 0 V 81 4989 * 1159 3532 * * * 4433 * * * 4333 * 4725 * * * 1734 * * 81 0 * * * * 0 * 3677 0 1000 L 82 4149 * * * 866 * * * * 2510 * * * * * * * 3640 * 2847 82 65 4497 * 1000 1000 * * 3631 1000 0 E 83 * * 1117 1577 * * * * * * * 3486 * 4014 * 4246 * * * * 83 0 * * * * * * 3631 0 0 F 84 * * * * 2004 * * 4497 * * * * * 4014 * * * * 1154 2359 84 759 1289 * 1000 1000 * * 3631 2880 0 L 85 * 3802 * * * * * * * 1129 2055 * * * * 3981 * 2580 * * 85 0 * * * * * * 3863 0 0 P 86 4049 * * 4129 * * * * 3115 * * 4123 1613 3945 1654 * * * * * 86 0 * * * * * * 3863 0 0 E 87 4319 * * 1422 * 3015 * * 4049 * * * * * 2426 2276 * * * * 87 0 * * * * * * 3863 0 0 M 88 3567 * * 3338 * * * * * 1618 1409 * * * * * * 3126 * * 88 0 * * * * * * 3863 0 0 V 89 2196 * * * * * * * * * * * * * * 2941 1509 1736 * * 89 0 * * * * * * 3863 0 0 L 90 * * * 4333 2941 * * 3340 2049 2625 3802 * * * 2431 4049 * * * * 90 0 * * * * * * 3863 0 0 S 91 3381 * 4319 1250 * * * * 2475 * * 4264 * 3802 * 4324 3646 * * * 91 0 * * * * * * 3863 0 0 Q 92 4333 * * 3126 * 2507 * * * 3567 3937 2441 * 2612 4319 3152 * * * * 92 0 * * * * * * 3863 0 0 I 93 * * * * * * * 905 * 2593 2888 * * * * * 4319 3121 * * 93 0 * * * * * * 3863 0 0 K 94 2195 * 2272 2872 * * * * 4324 * * * * 2394 3140 * 3570 * * * 94 0 * * * * * * 3863 0 0 Q 95 4049 * 4123 1411 * 4129 * * 2441 * * * * 2923 4358 3567 * * * * 95 0 * * * * * * 3863 0 0 S 96 2029 * 2603 3345 * 2253 * * * * * * * * * 2191 * 3981 * * 96 0 * * * * * * 3863 0 0 N 97 * * * * * * * * * * * 175 * * * * 3126 * * * 97 0 * * * * * * 3863 0 0 G 98 3802 * 4333 4049 * 3142 * 2439 3945 2228 2925 * * * * * 3937 4466 * * 98 0 * * * * * * 3863 0 0 N 99 4264 * 3153 1658 * 4466 * * 3121 * * 3342 * * 4049 3567 3120 * * * 99 0 * * * * * * 3863 0 0 H 100 4049 * * * * * 1848 3802 * 1462 3126 * * * * * * 3981 * 4349 100 0 * * * * * * 3863 0 0 R 101 * * * * * * * * * * 1366 4123 * 3802 1407 4358 4129 * * * 101 0 * * * * * * 3863 0 0 R 102 4333 * * * * * * * 3126 * * * * * 259 * * * * * 102 0 * * * * * * 3863 0 0 S 103 2761 * 3121 2264 * 3802 4264 * 3945 * * 4401 * 2424 * 3223 * * * * 103 0 * * * * * * 3863 0 0 L 104 * * * * 2956 * 2358 * * 1840 3218 * * * * * * * 4049 2127 104 0 * * * * * * 3863 0 0 L 105 * * * * * * * * * 223 * * * * * * * 2803 * * 105 0 * * * * * * 3583 0 0 E 106 * * * 779 * * * * 2040 * 2521 * * * * * * * * * 106 0 * * * * * * 2908 0 0 R 107 * * * * * * * * * * * * * * 0 * * * * * 107 0 * * * * * * 2792 0 0 L 108 * * * * * * * 2058 * 1148 1696 * * * * * * * * * 108 0 * * 0 * * * 2391 0 0 //